RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 UBL4AP11441 157 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ETFAP13804 333 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 CCNA2P20248 432 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ATP6V1C1P21283 382 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 LOXP28300 417 aaPredicted RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 OPRM1P35372 400 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 CPA2P48052 419 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ZNF41P51814 821 aaPredicted RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 ART1P52961 327 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 MVDP53602 400 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ATP12AP54707 1039 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 PSMD4P55036 377 aaKnown RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 FAPQ12884 760 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 SKP2Q13309 424 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 FHL3Q13643 280 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 QPRTQ15274 297 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 SGCBQ16585 318 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ZNF239Q16600 458 aaKnown RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 ARHGAP11BQ3KRB8 267 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 VPS26BQ4G0F5 336 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 NXNQ6DKJ4 435 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 HEPHL1Q6MZM0 1159 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ZCCHC12Q6PEW1 402 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 COMTD1Q86VU5 262 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ZNF619Q8N2I2 560 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 GTPBP8Q8N3Z3 284 aaPredicted RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 ZNF527Q8NB42 609 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 CHDHQ8NE62 594 aaPredicted RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 IL17RDQ8NFM7 739 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 OR8J2Q8NGG1 315 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 OR2V1Q8NHB1 315 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 GPR119Q8TDV5 335 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 XAGE5Q8WWM1 108 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 CNOT9Q92600 299 aaKnown RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 ZNF75CPQ92670 426 aaPredicted RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 TESCQ96BS2 214 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ROPN1LQ96C74 230 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 MAELQ96JY0 434 aaKnown RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 KLHL15Q96M94 604 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ZNF300Q96RE9 604 aaPredicted RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 THUMPD3Q9BV44 507 aaKnown RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 OR11A1Q9GZK7 315 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ZNF350Q9GZX5 532 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 PTGES2Q9H7Z7 377 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 SDHAF3Q9NRP4 125 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 UBQLN4Q9NRR5 601 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 SERTAD4Q9NUC0 356 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ATAD3AQ9NVI7 634 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 MRTO4Q9UKD2 239 aaKnown RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 DTNAQ9Y4J8 743 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 AP4B1Q9Y6B7 739 aa4.05□□□□□ -1.76
CUL3-216ENST00000617432 ZNF469Q96JG9 3925 aaPredicted RBP4.05□□□□□ -1.76
CUL3-216ENST00000617432 PRSS51A0A1B0GVH4 220 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 FAM90A10PA6NDY2 464 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 CCDC154A6NI56 674 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 SMAD9O15198 467 aaKnown RBP4.04□□□□□ -1.76
CUL3-216ENST00000617432 HDAC3O15379 428 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 ZNF264O43296 627 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 FRS3O43559 492 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 SS18L1O75177 396 aaPredicted RBP4.04□□□□□ -1.76
CUL3-216ENST00000617432 GKN3PP0CG01 181 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 PRG2P13727 222 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 POU2F1P14859 743 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 HPGDP15428 266 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 ZNF17P17021 662 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 HOXB9P17482 250 aaPredicted RBP4.04□□□□□ -1.76
CUL3-216ENST00000617432 CAPN3P20807 821 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 PTNP21246 168 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 UQCRC2P22695 453 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 AGTR1P30556 359 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 S100A3P33764 101 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 RYKP34925 604 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 GCKP35557 465 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 UGT2B10P36537 528 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 PGM1P36871 562 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 RPL3P39023 403 aaKnown RBP4.04□□□□□ -1.76
CUL3-216ENST00000617432 MTNR1BP49286 362 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 THBS3P49746 956 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 P2RX1P51575 399 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 PSPHP78330 225 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 HOXC5Q00444 222 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 MAD2L1Q13257 205 aaPredicted RBP4.04□□□□□ -1.76
CUL3-216ENST00000617432 PIN1Q13526 163 aaPredicted RBP4.04□□□□□ -1.76
CUL3-216ENST00000617432 FGFBP1Q14512 234 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 ZNF141Q15928 474 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 BCL2A1Q16548 175 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 TMEM176BQ3YBM2 270 aaPredicted RBP4.04□□□□□ -1.76
CUL3-216ENST00000617432 GPAT3Q53EU6 434 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 HBMQ6B0K9 141 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 PAMR1Q6UXH9 720 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 ZNF836Q6ZNA1 936 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 ZNF621Q6ZSS3 439 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 C16orf62Q7Z3J2 963 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 ZBTB46Q86UZ6 589 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 VRK2Q86Y07 508 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 FUNDC1Q8IVP5 155 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 TUSC5Q8IXB3 177 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 MSRB3Q8IXL7 192 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 FAM71CQ8NEG0 241 aa4.04□□□□□ -1.76
CUL3-216ENST00000617432 RNF128Q8TEB7 428 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms