RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 LRRN3E7EW58 273 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 NPIPA5E9PKD4 350 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 E9PQ18 207 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 ERVH48-1M5A8F1 160 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 PLPP3O14495 311 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 BHLHE40O14503 412 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 XKRYO14609 159 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 PPP1R3DO95685 299 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CELA3AP09093 270 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SDHAP31040 664 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 POLR2IP36954 125 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 AQP2P41181 271 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 EIF1AXP47813 144 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CARD18P57730 90 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 RAP1BP61224 184 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 RAP1AP62834 184 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CSNK2BP67870 215 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 KLRB1Q12918 225 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TOP3AQ13472 1001 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SNAPC1Q16533 368 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 KRTCAP3Q53RY4 240 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 C1QL3Q5VWW1 255 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 VASNQ6EMK4 673 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TMEM225Q6GV28 225 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 PTCHD4Q6ZW05 846 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 PXKQ7Z7A4 578 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 UEVLDQ8IX04 471 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 UBQLNLQ8IYU4 475 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 GHDCQ8N2G8 530 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 LRRC17Q8N6Y2 441 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TEX19Q8NA77 164 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 OR10D3Q8NH80 312 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 RFKQ969G6 155 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 ERMAPQ96PL5 475 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 KATNB1Q9BVA0 655 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SF3B5Q9BWJ5 86 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 DEFB127Q9H1M4 99 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 NRIP3Q9NQ35 241 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CMC2Q9NRP2 79 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CLN6Q9NWW5 311 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 ZMIZ1Q9ULJ6 1067 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 NPIPA1Q9UND3 350 aa11.92□□□□□ -0.5
CDK5RAP3-205ENST00000577802 URB1O60287 2271 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 A0A0J9YW62 118 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 LOC102725191A0A1B0GVB3 256 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SH3D21A4FU49 640 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 NPIPA2E9PIF3 369 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 NPIPA3F8WFD2 350 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SURF4O15260 269 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 AKR7A3O95154 331 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TNFAIP8O95379 198 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 WISP1O95388 367 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 GNAO1P09471 354 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CPN1P15169 458 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 EPHA2P29317 976 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SHC1P29353 583 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 AGFG1P52594 562 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CLDN18P56856 261 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 FXYD6P3P58550 94 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CTXN1P60606 82 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SNRPGP62308 76 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 FOXK1P85037 733 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 LTBQ06643 244 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 C1DQ13901 141 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 MAD2L1BPQ15013 274 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 POU4F3Q15319 338 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CTU2Q2VPK5 515 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 LINC00303Q3SY05 128 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 GID4Q8IVV7 300 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 ENTHD1Q8IYW4 607 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 IQCF1Q8N6M8 205 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 LSM14AQ8ND56 463 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TMEM163Q8TC26 289 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 ADGRG7Q96K78 797 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 ADAD1Q96M93 576 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 OXGR1Q96P68 337 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SNX18Q96RF0 628 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 YTHDF1Q9BYJ9 559 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SLC25A18Q9H1K4 315 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TVP23BQ9NYZ1 205 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 EMC3Q9P0I2 261 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 NCKAP5O14513 1909 aa11.91□□□□□ -0.5
CDK5RAP3-205ENST00000577802 NCOR2Q9Y618 2525 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 IRGMA1A4Y4 181 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 C11orf98E9PRG8 122 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CLIC3O95833 236 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TXNDC12O95881 172 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 RENP00797 406 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 ZNF43P17038 809 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CHN2P52757 468 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CLDN15P56746 228 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CLDN20P56880 219 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CXCR4P61073 352 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 RPL27P61353 136 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 HSF1Q00613 529 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 POU3F1Q03052 451 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 KRR1Q13601 381 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 FHL1Q13642 323 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms