RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 GADD45GO95257 159 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 IL2RAP01589 272 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 FCGR2AP12318 317 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 COL8A1P27658 744 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 CHRNB4P30926 498 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 UQCRC1P31930 480 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 HMGA2P52926 109 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 PER3P56645 1201 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 RPS4XP62701 263 aaKnown RBP9.66□□□□□ -0.86
TPM1-217ENST00000559108 CHRNB3Q05901 458 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 RPL18Q07020 188 aaKnown RBP9.66□□□□□ -0.86
TPM1-217ENST00000559108 PDK3Q15120 406 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 HSPB2Q16082 182 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 FAM98BQ52LJ0 330 aaKnown RBP9.66□□□□□ -0.86
TPM1-217ENST00000559108 OR2T5Q6IEZ7 315 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 C5orf46Q6UWT4 87 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 TFAP2EQ6VUC0 442 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 ZNF730Q6ZMV8 503 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 C22orf34Q6ZV56 151 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 CREB3L2Q70SY1 520 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 LINGO2Q7L985 606 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 C10orf53Q8N6V4 93 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 ZNF610Q8N9Z0 462 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 OR2T29Q8NH02 315 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 LIPHQ8WWY8 451 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 BPIFA2Q96DR5 249 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 TXNDC15Q96J42 360 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 ALPK1Q96QP1 1244 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 SFXN3Q9BWM7 321 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 TAPBPLQ9BX59 468 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 TRIM15Q9C019 465 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 ANKRD19PQ9H560 264 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 FKRPQ9H9S5 495 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 MCCC2Q9HCC0 563 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 TIGARQ9NQ88 270 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 MED31Q9Y3C7 131 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 BAHCC1Q9P281 2608 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 TRAV27A0A087WT01 109 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 ZNF724A8MTY0 619 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 A8MXE2 369 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 OR2T1O43869 369 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 EIF1BO60739 113 aaKnown RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 ENTPD5O75356 428 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 CLDN14O95500 239 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 IL18BPO95998 194 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 PLGP00747 810 aaPredicted RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 MT-ATP6P00846 226 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 IGF2P01344 180 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 IGHV3-9P01782 118 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 TP53P04637 393 aaPredicted RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 CRHP06850 196 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 YES1P07947 543 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 IGFBP1P08833 259 aaPredicted RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 UMPSP11172 480 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 AQP2P41181 271 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 SELENOPP49908 381 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 DBPQ10586 325 aaPredicted RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 RNPS1Q15287 305 aaKnown RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 POU4F3Q15319 338 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 SF3B4Q15427 424 aaKnown RBP eCLIP9.65□□□□□ -0.861e-9■■□□□ 12.9
TPM1-217ENST00000559108 PHYHD1Q5SRE7 291 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 OR2A2Q6IF42 318 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 PGBD2Q6P3X8 592 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 THSD4Q6ZMP0 1018 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 TMPRSS11FQ6ZWK6 438 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 H1FNTQ75WM6 255 aaPredicted RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 MAMDC2Q7Z304 686 aaPredicted RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 LUZP2Q86TE4 346 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 GPAT4Q86UL3 456 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 IGFN1Q86VF2 1251 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 CYP4Z1Q86W10 505 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 SCAIQ8N9R8 606 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 ACBD4Q8NC06 268 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 ADPRHL1Q8NDY3 354 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 OR6K3Q8NGY3 331 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 OR5J2Q8NH18 312 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 PIGXQ8TBF5 258 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 PYDC1Q8WXC3 89 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 HS6ST2Q96MM7 605 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 ZFP3Q96NJ6 502 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 TNFRSF13CQ96RJ3 184 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 ZNF347Q96SE7 839 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 EPYCQ99645 322 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 MED29Q9NX70 200 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 KLHL9Q9P2J3 617 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 ZNF629Q9UEG4 869 aaPredicted RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 ZNF229Q9UJW7 825 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 B3GALT5Q9Y2C3 310 aa9.65□□□□□ -0.86
TPM1-217ENST00000559108 FAM32AQ9Y421 112 aaKnown RBP9.65□□□□□ -0.86
TPM1-217ENST00000559108 EEF1E1-BLOC1S5C9J1V9 151 aa9.64□□□□□ -0.87
TPM1-217ENST00000559108 C11orf98E9PRG8 122 aa9.64□□□□□ -0.87
TPM1-217ENST00000559108 TNFRSF11BO00300 401 aa9.64□□□□□ -0.87
TPM1-217ENST00000559108 EEF1E1O43324 174 aaKnown RBP9.64□□□□□ -0.87
TPM1-217ENST00000559108 SERPINI2O75830 405 aa9.64□□□□□ -0.87
TPM1-217ENST00000559108 SMNDC1O75940 238 aaKnown RBP eCLIP9.64□□□□□ -0.871e-8■■□□□ 11.9
TPM1-217ENST00000559108 ZNF432O94892 652 aa9.64□□□□□ -0.87
TPM1-217ENST00000559108 F13BP05160 661 aa9.64□□□□□ -0.87
TPM1-217ENST00000559108 ADORA3P0DMS8 318 aa9.64□□□□□ -0.87
TPM1-217ENST00000559108 CD8BP10966 210 aa9.64□□□□□ -0.87
TPM1-217ENST00000559108 ITGA2P17301 1181 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms