RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 OR4A15Q8NGL6 344 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 ACMSDQ8TDX5 336 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 ART4Q93070 314 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 C9orf85Q96MD7 179 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 OR5M11Q96RB7 305 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 FMO2Q99518 471 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 SLC6A7Q99884 636 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 FEM1AQ9BSK4 669 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 DUSP16Q9BY84 665 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 RANBP3Q9H6Z4 567 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 DYRK4Q9NR20 520 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 MBD2Q9UBB5 411 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 PEX16Q9Y5Y5 336 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 ALG6Q9Y672 507 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 CROCCQ5TZA2 2017 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 ZNF646O15015 1829 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 TRAV6A0A075B6T7 132 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 SMCO2A6NFE2 343 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 MSH4O15457 936 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 TAPBPO15533 448 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 PRKAB2O43741 272 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 HCN1O60741 890 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 CRTAPO75718 401 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 CBR3O75828 277 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 LY6G6DO95868 133 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 IGSF6O95976 241 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 GAPDHP04406 335 aaKnown RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 HOXB7P09629 217 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 CCL2P13500 99 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 RRM2P31350 389 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 MEOX2P50222 304 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 UBE2IP63279 158 aaKnown RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 OC90Q02509 493 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 CDH17Q12864 832 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 KLHL38Q2WGJ6 581 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 LGSNQ5TDP6 509 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 SPECC1LQ69YQ0 1117 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 CLEC6AQ6EIG7 209 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 ACSM5Q6NUN0 579 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 BTNL3Q6UXE8 466 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 C2orf66Q6UXQ4 117 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 C19orf35Q6ZS72 473 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 COPS6Q7L5N1 327 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 MMAAQ8IVH4 418 aaKnown RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 NKAIN4Q8IVV8 208 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 SLC35F2Q8IXU6 374 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 ZNF525Q8N782 197 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 FAM86B1Q8N7N1 296 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 OR9G4Q8NGQ1 327 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 CNIH3Q8TBE1 160 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 TFB1MQ8WVM0 346 aaKnown RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 BADQ92934 168 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 DLX4Q92988 240 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 NUS1Q96E22 293 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 SDSLQ96GA7 329 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 TIMD4Q96H15 378 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 CCDC94Q9BW85 323 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 PRRG3Q9BZD7 231 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 TM6SF2Q9BZW4 377 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 MFFQ9GZY8 342 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 OR52A5Q9H2C5 316 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 ANKRD19PQ9H560 264 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 MYOZ2Q9NPC6 264 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 DCAF13Q9NV06 445 aaKnown RBP3.7□□□□□ -1.82
SCFD1-211ENST00000554437 CYTH4Q9UIA0 394 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 NTNG1Q9Y2I2 539 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 KIF25-AS1Q9Y6Z4 181 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 ATP10AO60312 1499 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 MROH7-TTC4A0A0A0MT08 1334 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 GAKO14976 1311 aa3.7□□□□□ -1.82
SCFD1-211ENST00000554437 NEURL4Q96JN8 1562 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 KLF18A0A0U1RQI7 1052 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 GSTTP1A0A1W2PQM5 241 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 G3V3Y1 287 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 G3V4G9 280 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 LATO43561 262 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 EFNA2O43921 213 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 RAMP3O60896 148 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 CDK14O94921 469 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 DUSP14O95147 198 aaKnown RBP3.69□□□□□ -1.82
SCFD1-211ENST00000554437 KLHL2O95198 593 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 CA1P00915 261 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-211ENST00000554437 BDKRB1P46663 353 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 RFX3P48380 749 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 CDK16Q00536 496 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 NDPQ00604 133 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 RGS1Q08116 209 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 NCF4Q15080 339 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 UBE2V2Q15819 145 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 ZIC1Q15915 447 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 VPS26BQ4G0F5 336 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 TP53I3Q53FA7 332 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 C6orf183Q5T699 404 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 SLC22A10Q63ZE4 541 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 PRR5LQ6MZQ0 368 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 H3F3CQ6NXT2 135 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 HACD2Q6Y1H2 254 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 NDUFAF7Q7L592 441 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 RBM45Q8IUH3 476 aaKnown RBP3.69□□□□□ -1.82
SCFD1-211ENST00000554437 DHRSXQ8N5I4 330 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms