RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ZNF83P51522 516 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 EFNA4P52798 201 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 H3F3AP84243 136 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 SPOCK1Q08629 439 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 RABL3Q5HYI8 236 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF311Q5JNZ3 666 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 MRPL2Q5T653 305 aaKnown RBP10.39□□□□□ -0.75
CKAP4-202ENST00000552828 NET1Q7Z628 596 aaPredicted RBP10.39□□□□□ -0.75
CKAP4-202ENST00000552828 VRK2Q86Y07 508 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 SLC30A8Q8IWU4 369 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF440Q8IYI8 595 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 DEPDC4Q8N2C3 294 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 UBE2J2Q8N2K1 259 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF525Q8N782 197 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 ANKS4BQ8N8V4 417 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 WDR31Q8NA23 367 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 HIPK4Q8NE63 616 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 OR52N5Q8NH56 324 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF563Q8TA94 476 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 PIGXQ8TBF5 258 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 C10orf105Q8TEF2 133 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 CNOT9Q92600 299 aaKnown RBP10.39□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF607Q96SK3 696 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 SPATA5L1Q9BVQ7 753 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 SPATA9Q9BWV2 254 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 BEX2Q9BXY8 128 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 CHRNA9Q9UGM1 479 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 ANGPT4Q9Y264 503 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 TRAPPC4Q9Y296 219 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF443Q9Y2A4 671 aaPredicted RBP10.39□□□□□ -0.75
CKAP4-202ENST00000552828 NOSIPQ9Y314 301 aaKnown RBP10.39□□□□□ -0.75
CKAP4-202ENST00000552828 HDGFL3Q9Y3E1 203 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 SPIN1Q9Y657 262 aaPredicted RBP10.39□□□□□ -0.75
CKAP4-202ENST00000552828 CIB4A0PJX0 185 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 CDHR4A6H8M9 788 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 CFAP73A6NFT4 308 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 CCT8L1PA6NM43 557 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 IGHV3-9P01782 118 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 ITGA5P08648 1049 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 CSF3P09919 207 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 PRDX6P30041 224 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 FABP6P51161 128 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 RNF220Q5VTB9 566 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 CYB5R2Q6BCY4 276 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 C6orf89Q6UWU4 347 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF836Q6ZNA1 936 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 GRINAQ7Z429 371 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 ARPINQ7Z6K5 226 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 ADGRG3Q86Y34 549 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 PTOV1Q86YD1 416 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 C17orf78Q8N4C9 275 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 FAM168AQ92567 244 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 ZHX1-C8orf76Q96EF9 292 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 ARL5BQ96KC2 179 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 HOPXQ9BPY8 73 aaPredicted RBP10.38□□□□□ -0.75
CKAP4-202ENST00000552828 CTPS2Q9NRF8 586 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 RLIMQ9NVW2 624 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 POU2F3Q9UKI9 436 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 AP3M1Q9Y2T2 418 aa10.38□□□□□ -0.75
CKAP4-202ENST00000552828 PRORSD1PA6NEY8 169 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 MRPL33O75394 65 aaKnown RBP10.37□□□□□ -0.75
CKAP4-202ENST00000552828 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 TFPIP10646 304 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 BMP4P12644 408 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 USF1P22415 310 aaPredicted RBP10.37□□□□□ -0.75
CKAP4-202ENST00000552828 AQP1P29972 269 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 PRKAR1BP31321 381 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 APOBEC3AP31941 199 aaPredicted RBP10.37□□□□□ -0.75
CKAP4-202ENST00000552828 PCGF2P35227 344 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 IDH2P48735 452 aaKnown RBP10.37□□□□□ -0.75
CKAP4-202ENST00000552828 GZMMP51124 257 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 FOXG1P55316 489 aaPredicted RBP10.37□□□□□ -0.75
CKAP4-202ENST00000552828 PLAURQ03405 335 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 CHRNB3Q05901 458 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 KRTAP24-1Q3LI83 254 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 INTS11Q5TA45 600 aaKnown RBP10.37□□□□□ -0.75
CKAP4-202ENST00000552828 HACD2Q6Y1H2 254 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 CCDC103Q8IW40 242 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 CLIP4Q8N3C7 705 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 CCDC197Q8NCU1 140 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 C1orf162Q8NEQ5 155 aaPredicted RBP10.37□□□□□ -0.75
CKAP4-202ENST00000552828 BHLHE22Q8NFJ8 381 aaPredicted RBP10.37□□□□□ -0.75
CKAP4-202ENST00000552828 HTRA1Q92743 480 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 SLC35B4Q969S0 331 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 BOD1Q96IK1 185 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 PIF1Q9H611 641 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 FKRPQ9H9S5 495 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 PARPBPQ9NWS1 579 aa10.37□□□□□ -0.75
CKAP4-202ENST00000552828 A0A1W2PR80 420 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 VWC2LB2RUY7 222 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 M0QX08 132 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 M0R1B8 84 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 FAAHO00519 579 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 EIF1BO60739 113 aaKnown RBP10.36□□□□□ -0.75
CKAP4-202ENST00000552828 GKN3PP0CG01 181 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 HTR3AP46098 478 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 NUDT2P50583 147 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 MAP2K6P52564 334 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 PCBP3P57721 371 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms