RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ZNF227Q86WZ6 799 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 KDM8Q8N371 416 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF417Q8TAU3 575 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 TBC1D15Q8TC07 691 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 ADAMTS17Q8TE56 1095 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC39A7Q92504 469 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF587Q96SQ5 575 aaPredicted RBP11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 TTTY10Q9BZA0 68 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 RACGAP1Q9H0H5 632 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 TMEM185BQ9H7F4 350 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 EXOSC1Q9Y3B2 195 aaKnown RBP11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 NCKAP5O14513 1909 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 TMEM129A0AVI4 362 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 SNTNA6NMZ2 147 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 H3BML4 177 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 MAGEB4O15481 346 aaPredicted RBP11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 BCL10O95999 233 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 IFNGP01579 166 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 HLA-DOBP13765 273 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 SPI1P17947 270 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 WNT4P56705 351 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF85Q03923 595 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 SRSF6Q13247 344 aaKnown RBP11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC25A53Q5H9E4 307 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 FAM69AQ5T7M9 428 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 ATP1A1-AS1Q5TC04 95 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 LIPKQ5VXJ0 399 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 H3F3CQ6NXT2 135 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 LEG1Q6P5S2 330 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 DYNC2LI1Q8TCX1 351 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 STK35Q8TDR2 534 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 PAQR8Q8TEZ7 354 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 SPRYD4Q8WW59 207 aaPredicted RBP11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 TMEM234Q8WY98 164 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 C1GALT1C1Q96EU7 318 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 FRMD6Q96NE9 622 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 CPNE5Q9HCH3 593 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 KLHL21Q9UJP4 597 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF292O60281 2723 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 PTPRBP23467 1997 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 HTR3EA5X5Y0 456 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 CCRL2O00421 344 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 TP53I11O14683 189 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 TXNDC12O95881 172 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 CD63P08962 238 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 SBK2P0C263 348 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 MYL12AP19105 171 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 KLK2P20151 261 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 NAA10P41227 235 aaPredicted RBP11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 CRYBB2P43320 205 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 RPS25P62851 125 aaKnown RBP11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 GABREP78334 506 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 MLLT11Q13015 90 aaPredicted RBP11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 LINC01590Q5TEZ4 76 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 VASNQ6EMK4 673 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 MAMDC2Q7Z304 686 aaPredicted RBP11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 PHC2Q8IXK0 858 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 BEST3Q8N1M1 668 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 TMEM156Q8N614 296 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 OR10H4Q8NGA5 316 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 OR5J2Q8NH18 312 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 SMPDL3BQ92485 455 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 NKD1Q969G9 470 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 DCLRE1CQ96SD1 692 aaKnown RBP11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 ARHGAP9Q9BRR9 750 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 JAM3Q9BX67 310 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 ANGPTL4Q9BY76 406 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 SPIN1Q9Y657 262 aaPredicted RBP11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 SIRT4Q9Y6E7 314 aaPredicted RBP11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 FAM186AA6NE01 2351 aa11.06□□□□□ -0.64
AP003559.1-201ENST00000540906 IRGMA1A4Y4 181 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC22A31A6NKX4 558 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 C21orf140B9A014 251 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 PLPP3O14495 311 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SELENOFO60613 162 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 DXOO77932 396 aaKnown RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 AHSA1O95433 338 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 GPANK1O95872 356 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 HIST1H2ABP04908 130 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SERPINA7P05543 415 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 MSX1P28360 303 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SDHAP31040 664 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 ATP6V1E1P36543 226 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 APOBEC1P41238 236 aaKnown RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 HTR3AP46098 478 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF41P51814 821 aaPredicted RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 RUNX1T1Q06455 604 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 KRR1Q13601 381 aaKnown RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 OR7A5Q15622 319 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SGCBQ16585 318 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 GLYR1Q49A26 553 aaPredicted RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 OTPQ5XKR4 325 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 HIST3H2AQ7L7L0 130 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 OR4K17Q8NGC6 315 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 HIST1H2ACQ93077 130 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 THOC3Q96J01 351 aaKnown RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 GNRHR2Q96P88 292 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 BCL7BQ9BQE9 202 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 GPR87Q9BY21 358 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms