RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 ALG12Q9BV10 488 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 MMP25Q9NPA2 562 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 ACOXLQ9NUZ1 547 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 AKAP7Q9P0M2 348 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-216ENST00000524481 FREM3P0C091 2139 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 CFAP47Q6ZTR5 3102 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 DOCK7Q96N67 2140 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 PNMTP11086 282 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 EFNB1P98172 346 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 IL18Q14116 193 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 ZNF74Q16587 644 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 DHRS13Q6UX07 377 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 LRRC69Q6ZNQ3 347 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 DCDC5Q6ZRR9 648 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 RABEPKQ7Z6M1 372 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 WDR5BQ86VZ2 330 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 YIPF7Q8N8F6 280 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 ZNF417Q8TAU3 575 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 ZNF587Q96SQ5 575 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-216ENST00000524481 SLC30A2Q9BRI3 323 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 WDR76Q9H967 626 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 SMURF1Q9HCE7 757 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 NDUFB11Q9NX14 153 aa10.68□□□□□ -0.7
PTPRK-216ENST00000524481 LNP1A1A4G5 178 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 IRGMA1A4Y4 181 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 HPGDSO60760 199 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 ZFAND5O76080 213 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 AKR7A3O95154 331 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 TFP02787 698 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 SPARCP09486 303 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 INHBBP09529 407 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 SPI1P17947 270 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 RFC3P40938 356 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 CBFBQ13951 182 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 ARMC4Q5T2S8 1044 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 STEAP3Q658P3 488 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 KMT5CQ86Y97 462 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 GRAMD2AQ8IUY3 354 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 HSD17B8Q92506 261 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 TMCO6Q96DC7 493 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 COX4I2Q96KJ9 171 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 SLC25A18Q9H1K4 315 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 SEC61A2Q9H9S3 476 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 CENPMQ9NSP4 180 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 AK6Q9Y3D8 172 aaKnown RBP10.67□□□□□ -0.7
PTPRK-216ENST00000524481 PEX16Q9Y5Y5 336 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 EML5Q05BV3 1969 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 ACOD1A6NK06 481 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 ITGA10O75578 1167 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 MPZL1O95297 269 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 IMPDH2P12268 514 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 DUSP3P51452 185 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-216ENST00000524481 CD300CQ08708 224 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 KRR1Q13601 381 aaKnown RBP10.67□□□□□ -0.7
PTPRK-216ENST00000524481 B3GNTL1Q67FW5 361 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-216ENST00000524481 RPL13AP3Q6NVV1 102 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 ATG4DQ86TL0 474 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-216ENST00000524481 SLC35F2Q8IXU6 374 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 OR5B2Q96R09 309 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 CNN2Q99439 309 aaKnown RBP10.67□□□□□ -0.7
PTPRK-216ENST00000524481 SPSB2Q99619 263 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 CDCP1Q9H5V8 836 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 FGF20Q9NP95 211 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-216ENST00000524481 CD14P08571 375 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 FBXO45P0C2W1 286 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 CPEP16870 476 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 PPP5CP53041 499 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 GAS1P54826 345 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 C19orf57Q0VDD7 668 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 DMRTC1Q5HYR2 192 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 VASNQ6EMK4 673 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 OR4K17Q8NGC6 315 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 ADGRL4Q9HBW9 690 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 AKIP1Q9NQ31 210 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 MYOTQ9UBF9 498 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 CRNNQ9UBG3 495 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-216ENST00000524481 COPS3Q9UNS2 423 aa10.67□□□□□ -0.7
PTPRK-216ENST00000524481 TMEM129A0AVI4 362 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 SHISA3A0PJX4 238 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 ZNF670-ZNF695F2Z2N8 137 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 CD40LGP29965 261 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 CTBP2P56545 445 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 CLDN12P56749 244 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 RAB25P57735 213 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 PRPS1P60891 318 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 POU3F1Q03052 451 aaPredicted RBP10.66□□□□□ -0.7
PTPRK-216ENST00000524481 SPEM2Q0P670 501 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 ACSM3Q53FZ2 586 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 ZNF440Q8IYI8 595 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 ZFP3Q96NJ6 502 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 PPIL3Q9H2H8 161 aaKnown RBP10.66□□□□□ -0.7
PTPRK-216ENST00000524481 LAMP5Q9UJQ1 280 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 PCDHGB6Q9Y5F9 930 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 SSX4O60224 188 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 TSPAN2O60636 221 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 TRAPPC6AO75865 159 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 RBM34P42696 430 aaKnown RBP10.66□□□□□ -0.7
PTPRK-216ENST00000524481 P2RX1P51575 399 aa10.66□□□□□ -0.7
PTPRK-216ENST00000524481 ZNF41P51814 821 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms