RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CGB2Q6NT52 195 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 NPSR1Q6W5P4 371 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 MEX3BQ6ZN04 569 aaKnown RBP15.02■□□□□ -0
PCDHA3-201ENST00000522353 MARCH3Q86UD3 253 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 SIMC1Q8NDZ2 872 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 BAHD1Q8TBE0 780 aaPredicted RBP15.02■□□□□ -0
PCDHA3-201ENST00000522353 MKRN2Q9H000 416 aaKnown RBP15.02■□□□□ -0
PCDHA3-201ENST00000522353 TRIM64CA6NLI5 447 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 F5H5P2 479 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 UPK1BO75841 260 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 PAHP00439 452 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 GAAP10253 952 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 APOBEC1P41238 236 aaKnown RBP15.02■□□□□ -0
PCDHA3-201ENST00000522353 BRIX1Q8TDN6 353 aaKnown RBP15.02■□□□□ -0
PCDHA3-201ENST00000522353 MS4A6EQ96DS6 147 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 ZNF681Q96N22 645 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 PCDHGA1Q9Y5H4 931 aa15.02■□□□□ -0
PCDHA3-201ENST00000522353 CDHR4A6H8M9 788 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 NKX6-3A6NJ46 265 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 ETV5P41161 510 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 ZNF91Q05481 1191 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 TBC1D28Q2M2D7 210 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 C1orf140Q5VVS0 124 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 BOD1Q96IK1 185 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 WNT16Q9UBV4 365 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 PRKRAO75569 313 aaKnown RBP15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 CD53P19397 219 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 ITPKCQ96DU7 683 aa15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 LSM5Q9Y4Y9 91 aaKnown RBP15.02□□□□□ -0.01
PCDHA3-201ENST00000522353 IGHV3-20A0A0C4DH32 117 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 TRBV4-1A0A0J9YWV2 114 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 PMS2P1A4D2B8 440 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 J3KTA2 159 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 PLPP1O14494 284 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 RAB40ALP0C0E4 278 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 OR8G3PP0DMU2 310 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 ZNF14P17017 642 aaPredicted RBP15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 SDHBP21912 280 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 LGALS4P56470 323 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 RPL23AP62750 156 aaKnown RBP15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 H1FNTQ75WM6 255 aaPredicted RBP15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 RAB40AQ8WXH6 277 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 COQ10AQ96MF6 247 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 ZNF649Q9BS31 505 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 THAP7Q9BT49 309 aaPredicted RBP15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 WDR76Q9H967 626 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 IL21Q9HBE4 155 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 TRAPPC2LQ9UL33 140 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 TMEM72A0PK05 275 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 OR6C76A6NM76 312 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 FIGNL2A6NMB9 653 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 GPR137BO60478 399 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 MSR1P21757 451 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 OPRL1P41146 370 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 P2RX1P51575 399 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 PPP2CBP62714 309 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 PPP2CAP67775 309 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 GABREP78334 506 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 SLC16A11Q8NCK7 471 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 OR56B1Q8NGI3 324 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 UPRTQ96BW1 309 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 OLAHQ9NV23 265 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 SLAMF8Q9P0V8 285 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 TAPBPO15533 448 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 SEC14L2O76054 403 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 APOC3P02656 99 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 CR2P20023 1033 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 CD22P20273 847 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 CXADRP78310 365 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 KCNAB1Q14722 419 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 AADACL4Q5VUY2 407 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 ZNF767PQ75MW2 155 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 COX15Q7KZN9 410 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 NLRP8Q86W28 1048 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 CPEB3Q8NE35 698 aaKnown RBP15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 OR4F15Q8NGB8 312 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 GATA6Q92908 595 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 TIMD4Q96H15 378 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 NRSN2Q9GZP1 204 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 TMEM38AQ9H6F2 299 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 SHOXO15266 292 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 IL1AP01583 271 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 ZNF92Q03936 586 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 IKZF1Q13422 519 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 GJC3Q8NFK1 279 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 BORCS7Q96B45 105 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 TMIGD2Q96BF3 282 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 NDRG4Q9ULP0 352 aaKnown RBP15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 TMEM221A6NGB7 291 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 SELPLGQ14242 412 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 MAML2Q8IZL2 1156 aaPredicted RBP15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 OR2T11Q8NH01 316 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 PATE1Q8WXA2 126 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 FBXO7Q9Y3I1 522 aa15.01□□□□□ -0.01
PCDHA3-201ENST00000522353 DSCR3O14972 297 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 IGLV3-25P01717 112 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 TFP02787 698 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 IFNA4P05014 189 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 TAS2R46P59540 309 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 SLC10A1Q14973 349 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms