RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 OAFQ86UD1 273 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 TUSC5Q8IXB3 177 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 HS3ST5Q8IZT8 346 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 SCAIQ8N9R8 606 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 AQP11Q8NBQ7 271 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 OR10G2Q8NGC3 310 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 OR9K2Q8NGE7 335 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 OR51A7Q8NH64 312 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 GIPC3Q8TF64 312 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 GTPBP3Q969Y2 492 aaKnown RBP10.6□□□□□ -0.71
CUX1-210ENST00000497815 MARVELD3Q96A59 401 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 SDCCAG3Q96C92 435 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 GMPPAQ96IJ6 420 aaPredicted RBP10.6□□□□□ -0.71
CUX1-210ENST00000497815 GPA33Q99795 319 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 PKP2Q99959 881 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 PSD2Q9BQI7 771 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 C12orf49Q9H741 205 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 NTN4Q9HB63 628 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 PDP1Q9P0J1 537 aaPredicted RBP10.6□□□□□ -0.71
CUX1-210ENST00000497815 RNF6Q9Y252 685 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 RASD1Q9Y272 281 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 B3GALT5Q9Y2C3 310 aa10.6□□□□□ -0.71
CUX1-210ENST00000497815 A0A1W2PNV4 684 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 UNC119BA6NIH7 251 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 MS4A18H0YCH9 400 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 RNF13O43567 381 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 SS18L1O75177 396 aaPredicted RBP10.59□□□□□ -0.71
CUX1-210ENST00000497815 BAG2O95816 211 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 IGF2P01344 180 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 GASTP01350 101 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 YES1P07947 543 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 BMP5P22003 454 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 PRKACGP22612 351 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 CTSSP25774 331 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 AGTR1P30556 359 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 ARHGDIAP52565 204 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 SMSP52788 366 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 ELF3P78545 371 aaPredicted RBP10.59□□□□□ -0.71
CUX1-210ENST00000497815 RPL18Q07020 188 aaKnown RBP10.59□□□□□ -0.71
CUX1-210ENST00000497815 PUDPQ08623 228 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 SLC17A1Q14916 467 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 MS4A18Q3C1V0 323 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 EEF1A1P5Q5VTE0 462 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 MTFR2Q6P444 385 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 VWA1Q6PCB0 445 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 FAM214BQ7L5A3 538 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.59□□□□□ -0.71
CUX1-210ENST00000497815 NUFIP2Q7Z417 695 aaKnown RBP10.59□□□□□ -0.71
CUX1-210ENST00000497815 LINC00471Q8N535 108 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 ICA1LQ8NDH6 482 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 ADPRHL1Q8NDY3 354 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 MOSPD2Q8NHP6 518 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 GNPDA2Q8TDQ7 276 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 OXGR1Q96P68 337 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 TNFRSF13CQ96RJ3 184 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 BDH2Q9BUT1 245 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 TAS2R5Q9NYW4 299 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 COQ3Q9NZJ6 369 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 EMC3Q9P0I2 261 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 ING1Q9UK53 422 aaPredicted RBP10.59□□□□□ -0.71
CUX1-210ENST00000497815 EMC9Q9Y3B6 208 aa10.59□□□□□ -0.71
CUX1-210ENST00000497815 MAGED1Q9Y5V3 778 aaPredicted RBP10.59□□□□□ -0.71
CUX1-210ENST00000497815 HTR3EA5X5Y0 456 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 SAC3D1A6NKF1 404 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 H0YHG0 523 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 FZD7O75084 574 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 TNFSF13O75888 250 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 SMNDC1O75940 238 aaKnown RBP eCLIP10.58□□□□□ -0.721e-5■■□□□ 11.9
CUX1-210ENST00000497815 VAMP5O95183 116 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 F13BP05160 661 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 HLA-DOBP13765 273 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 ZNF23P17027 643 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 ZNF43P17038 809 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 KIR2DL2P43627 348 aaPredicted RBP10.58□□□□□ -0.72
CUX1-210ENST00000497815 POU3F1Q03052 451 aaPredicted RBP10.58□□□□□ -0.72
CUX1-210ENST00000497815 PDK3Q15120 406 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 ANKRD34AQ69YU3 496 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 ZNF770Q6IQ21 691 aaPredicted RBP10.58□□□□□ -0.72
CUX1-210ENST00000497815 C1orf94Q6P1W5 598 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 SHQ1Q6PI26 577 aaKnown RBP10.58□□□□□ -0.72
CUX1-210ENST00000497815 MRGPRGQ86SM5 289 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 IGFN1Q86VF2 1251 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 LIX1LQ8IVB5 337 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 UEVLDQ8IX04 471 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 LIPHQ8WWY8 451 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 ZFP3Q96NJ6 502 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 ZNF385AQ96PM9 386 aaKnown RBP10.58□□□□□ -0.72
CUX1-210ENST00000497815 FEVQ99581 238 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 SF3B5Q9BWJ5 86 aaKnown RBP10.58□□□□□ -0.72
CUX1-210ENST00000497815 SFXN3Q9BWM7 321 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 BCO1Q9HAY6 547 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 MCCC2Q9HCC0 563 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 GLRX2Q9NS18 164 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 B3GAT1Q9P2W7 334 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 IL20RAQ9UHF4 553 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 NOSIPQ9Y314 301 aaKnown RBP10.58□□□□□ -0.72
CUX1-210ENST00000497815 FLVCR1Q9Y5Y0 555 aa10.58□□□□□ -0.72
CUX1-210ENST00000497815 ZGRF1Q86YA3 2104 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 IGKV3D-15A0A087WSY6 115 aa10.57□□□□□ -0.72
CUX1-210ENST00000497815 FAM90A27PA6NNH2 459 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms