RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 ELOVL5Q9NYP7 299 aa15.18■□□□□ 0.02
SNX17-209ENST00000494893 C6orf203Q9P0P8 240 aaPredicted RBP15.18■□□□□ 0.02
SNX17-209ENST00000494893 PRSS50Q9UI38 385 aa15.18■□□□□ 0.02
SNX17-209ENST00000494893 FLVCR1Q9Y5Y0 555 aa15.18■□□□□ 0.02
SNX17-209ENST00000494893 TEX15Q9BXT5 2789 aa15.18■□□□□ 0.02
SNX17-209ENST00000494893 HRNRQ86YZ3 2850 aaPredicted RBP15.17■□□□□ 0.02
SNX17-209ENST00000494893 NOTCH2Q04721 2471 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 FAM221AA4D161 298 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 TUBAL3A6NHL2 446 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 CHP2O43745 196 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 MT-ND1P03886 318 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 FABP3P05413 133 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 FUT4P22083 530 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 FASP25445 335 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 OR3A2P47893 321 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 VLDLRP98155 873 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 SLC34A1Q06495 639 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 IQCCQ4KMZ1 466 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 SWT1Q5T5J6 900 aaKnown RBP15.17■□□□□ 0.02
SNX17-209ENST00000494893 FAM222BQ8WU58 562 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 LRTOMTQ8WZ04 291 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 WFIKKN1Q96NZ8 548 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 PKP2Q99959 881 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 NAA11Q9BSU3 229 aaPredicted RBP15.17■□□□□ 0.02
SNX17-209ENST00000494893 TESMINQ9Y4I5 508 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 PDZD2O15018 2839 aa15.17■□□□□ 0.02
SNX17-209ENST00000494893 TRAV36DV7A0A075B6V5 113 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 LRRN3E7EW58 273 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 BGLAPP02818 100 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 EPXP11678 715 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 SSTR2P30874 369 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 PEX19P40855 299 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 ATP6AP1Q15904 470 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 ANKRD34AQ69YU3 496 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 TSEN54Q7Z6J9 526 aaKnown RBP15.16■□□□□ 0.02
SNX17-209ENST00000494893 GALNT5Q7Z7M9 940 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 RNF217Q8TC41 542 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 SLC25A36Q96CQ1 311 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 TMEM43Q9BTV4 400 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 ZNF426Q9BUY5 554 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 TAPBPLQ9BX59 468 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 MCCC2Q9HCC0 563 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 RIMS3Q9UJD0 308 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 SLC7A7Q9UM01 511 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 SLC9A8Q9Y2E8 581 aa15.16■□□□□ 0.02
SNX17-209ENST00000494893 SH3D21A4FU49 640 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 TRAPPC13A5PLN9 417 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 C16orf97H3BN30 126 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 hCG_2039718K7EN88 272 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 CLOCKO15516 846 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 DEAF1O75398 565 aaPredicted RBP15.15■□□□□ 0.02
SNX17-209ENST00000494893 IFNW1P05000 195 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 ITGA2P17301 1181 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 GRPRP30550 384 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 DAZAP2Q15038 168 aaPredicted RBP15.15■□□□□ 0.02
SNX17-209ENST00000494893 TSC22D1Q15714 1073 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 FAM69AQ5T7M9 428 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 HMBOX1Q6NT76 420 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 DEF8Q6ZN54 512 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 BEND4Q6ZU67 534 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 CXorf67Q86X51 503 aaPredicted RBP15.15■□□□□ 0.02
SNX17-209ENST00000494893 OR9K2Q8NGE7 335 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 MOGAT1Q96PD6 335 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 ZNF385AQ96PM9 386 aaKnown RBP15.15■□□□□ 0.02
SNX17-209ENST00000494893 AMBRA1Q9C0C7 1298 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 KLHL4Q9C0H6 718 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 SLC24A3Q9HC58 644 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 NDUFAF4Q9P032 175 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 EMC3Q9P0I2 261 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 B3GAT1Q9P2W7 334 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 DNAJB9Q9UBS3 223 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 NOSIPQ9Y314 301 aaKnown RBP15.15■□□□□ 0.02
SNX17-209ENST00000494893 ENPP4Q9Y6X5 453 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 CACNA1DQ01668 2161 aa15.15■□□□□ 0.02
SNX17-209ENST00000494893 MPDZO75970 2070 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 A6NNC1 897 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 M0R082 166 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 GPR171O14626 319 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 SIAH2O43255 324 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 CTAG2O75638 210 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 CST1P01037 141 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 THBDP07204 575 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 PSMB1P20618 241 aaKnown RBP15.14■□□□□ 0.01
SNX17-209ENST00000494893 CBLP22681 906 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 FOXG1P55316 489 aaPredicted RBP15.14■□□□□ 0.01
SNX17-209ENST00000494893 PIN1Q13526 163 aaPredicted RBP15.14■□□□□ 0.01
SNX17-209ENST00000494893 SNCBQ16143 134 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 C5orf46Q6UWT4 87 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 AMIGO2Q86SJ2 522 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 STK32CQ86UX6 486 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 EPHX4Q8IUS5 362 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 NKAIN4Q8IVV8 208 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 KDM8Q8N371 416 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 OR6S1Q8NH40 331 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 ZNF417Q8TAU3 575 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 SLC41A3Q96GZ6 507 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 CENPNQ96H22 339 aaPredicted RBP15.14■□□□□ 0.01
SNX17-209ENST00000494893 DACH2Q96NX9 599 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 ZNF347Q96SE7 839 aa15.14■□□□□ 0.01
SNX17-209ENST00000494893 ZNF587Q96SQ5 575 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms