RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 CD300AQ9UGN4 299 aa13.32□□□□□ -0.28
CXCL12-207ENST00000488591 LOC102725191A0A1B0GVB3 256 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 OR6C65A6NJZ3 312 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 KPNA4O00629 521 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-207ENST00000488591 AKAP8O43823 692 aaKnown RBP13.31□□□□□ -0.28
CXCL12-207ENST00000488591 KRT33AO76009 404 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 CH25HO95992 272 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 IGHV3-9P01782 118 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 NTF4P34130 210 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 LTBQ06643 244 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 FAPQ12884 760 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 FOXD4Q12950 439 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-207ENST00000488591 BHLHA15Q7RTS1 189 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-207ENST00000488591 ABHD12BQ7Z5M8 362 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-207ENST00000488591 UEVLDQ8IX04 471 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 RBM15BQ8NDT2 890 aaKnown RBP13.31□□□□□ -0.28
CXCL12-207ENST00000488591 TMEM239Q8WW34 195 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 HSD17B8Q92506 261 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 S100PBPQ96BU1 408 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 MOGAT1Q96PD6 335 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 ZNF385AQ96PM9 386 aaKnown RBP13.31□□□□□ -0.28
CXCL12-207ENST00000488591 PRSS27Q9BQR3 290 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 ZNF426Q9BUY5 554 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 CLEC4MQ9H2X3 399 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-207ENST00000488591 SLCO5A1Q9H2Y9 848 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 FKRPQ9H9S5 495 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 NANSQ9NR45 359 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 FAM32AQ9Y421 112 aaKnown RBP13.31□□□□□ -0.28
CXCL12-207ENST00000488591 NOX1Q9Y5S8 564 aa13.31□□□□□ -0.28
CXCL12-207ENST00000488591 DCHS2Q6V1P9 2916 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 FREM1Q5H8C1 2179 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 APCP25054 2843 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 CIB4A0PJX0 185 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 FAM221AA4D161 298 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 HTR3EA5X5Y0 456 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 LYZL6O75951 148 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 MT-ND1P03886 318 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 UMPSP11172 480 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 CRYGSP22914 178 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 IGHV1-2P23083 117 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 AHCYP23526 432 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 EDNRAP25101 427 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 YAP1P46937 504 aaKnown RBP13.3□□□□□ -0.28
CXCL12-207ENST00000488591 CLDN17P56750 224 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 TGFBR3Q03167 851 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 TRAM2Q15035 370 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 TSC22D1Q15714 1073 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 ZNF74Q16587 644 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 FXNQ16595 210 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 NIPAL3Q6P499 406 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 SSX8Q7RTT4 187 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 EPHX4Q8IUS5 362 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 NKAIN4Q8IVV8 208 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 OR5J2Q8NH18 312 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 TMEM255BQ8WV15 326 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 NSMCE2Q96MF7 247 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 NGBQ9NPG2 151 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 TAS2R16Q9NYV7 291 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 SEC14L4Q9UDX3 406 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 MALT1Q9UDY8 824 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 A4GNTQ9UNA3 340 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 EDARQ9UNE0 448 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 MED31Q9Y3C7 131 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 SNX13Q9Y5W8 968 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 ABCA12Q86UK0 2595 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 NOTCH2Q04721 2471 aa13.3□□□□□ -0.28
CXCL12-207ENST00000488591 MS4A18H0YCH9 400 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 PLPP3O14495 311 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 IGF2P01344 180 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 ADORA3P0DMS8 318 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 T-ENOLP0DO92 83 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 ITGA2P17301 1181 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 COX5AP20674 150 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 DNAJA1P31689 397 aaKnown RBP13.29□□□□□ -0.28
CXCL12-207ENST00000488591 MSX2P35548 267 aaPredicted RBP13.29□□□□□ -0.28
CXCL12-207ENST00000488591 PUDPQ08623 228 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 MS4A18Q3C1V0 323 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 TSPO2Q5TGU0 170 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 RINLQ6ZS11 566 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 PXKQ7Z7A4 578 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 P2RY8Q86VZ1 359 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 WFDC8Q8IUA0 241 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 OFCC1Q8IZS5 231 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 ZNF433Q8N7K0 673 aaPredicted RBP13.29□□□□□ -0.28
CXCL12-207ENST00000488591 MUCL1Q96DR8 90 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 SGTBQ96EQ0 304 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 C1orf21Q9H246 121 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 SLC7A10Q9NS82 523 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 RCE1Q9Y256 329 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 ENPP4Q9Y6X5 453 aa13.29□□□□□ -0.28
CXCL12-207ENST00000488591 ENO4A6NNW6 628 aa13.28□□□□□ -0.28
CXCL12-207ENST00000488591 LRRN3E7EW58 273 aa13.28□□□□□ -0.28
CXCL12-207ENST00000488591 ARPC2O15144 300 aa13.28□□□□□ -0.28
CXCL12-207ENST00000488591 SLC43A1O75387 559 aa13.28□□□□□ -0.28
CXCL12-207ENST00000488591 FUT1P19526 365 aa13.28□□□□□ -0.28
CXCL12-207ENST00000488591 SELENOPP49908 381 aa13.28□□□□□ -0.28
CXCL12-207ENST00000488591 UGT2B15P54855 530 aa13.28□□□□□ -0.28
CXCL12-207ENST00000488591 KRTAP10-9P60411 292 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms