RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 HOXB3P14651 431 aaPredicted RBP13.13□□□□□ -0.31
NR1H3-220ENST00000481020 DCTDP32321 178 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 CSF2RBP32927 897 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 H2BFSP57053 126 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 ACTBP60709 375 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 ACTG1P63261 375 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 OR2F1Q13607 317 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 SFRP5Q5T4F7 317 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 ANKRD16Q6P6B7 361 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 MOB3CQ70IA8 216 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 DEFB128Q7Z7B8 93 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 PAQR7Q86WK9 346 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 PIGKQ92643 395 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 PMEPA1Q969W9 287 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 RSPRY1Q96DX4 576 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 SMIM10Q96HG1 83 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 PDCD1LG2Q9BQ51 273 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 SLC25A21Q9BQT8 299 aaPredicted RBP13.13□□□□□ -0.31
NR1H3-220ENST00000481020 GINS4Q9BRT9 223 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 FXYD6Q9H0Q3 95 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 SLCO5A1Q9H2Y9 848 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 PIGMQ9H3S5 423 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 EXOSC3Q9NQT5 275 aaKnown RBP13.13□□□□□ -0.31
NR1H3-220ENST00000481020 POT1Q9NUX5 634 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 PURGQ9UJV8 347 aaKnown RBP13.13□□□□□ -0.31
NR1H3-220ENST00000481020 FBXL4Q9UKA2 621 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 PLCL2Q9UPR0 1127 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 YBX2Q9Y2T7 364 aaKnown RBP13.13□□□□□ -0.31
NR1H3-220ENST00000481020 COLEC10Q9Y6Z7 277 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 SPACA6W5XKT8 324 aa13.13□□□□□ -0.31
NR1H3-220ENST00000481020 MDC1Q14676 2089 aaKnown RBP13.12□□□□□ -0.31
NR1H3-220ENST00000481020 DNASE2O00115 360 aaPredicted RBP13.12□□□□□ -0.31
NR1H3-220ENST00000481020 SIGLEC6O43699 453 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 CXCL14O95715 111 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 RHOP08100 348 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 VSIG10L2P0DP72 767 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 HIST1H1CP16403 213 aaKnown RBP13.12□□□□□ -0.31
NR1H3-220ENST00000481020 HOXA1P49639 335 aaPredicted RBP13.12□□□□□ -0.31
NR1H3-220ENST00000481020 ERVFC1P60507 584 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 PRPS1P60891 318 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 SHEQ5VZ18 495 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 LIN54Q6MZP7 749 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 MTFR2Q6P444 385 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 ZNF433Q8N7K0 673 aaPredicted RBP13.12□□□□□ -0.31
NR1H3-220ENST00000481020 TNFAIP8L1Q8WVP5 186 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 HSPA12BQ96MM6 686 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 APMAPQ9HDC9 416 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 TM7SF3Q9NS93 570 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 HCFC1R1Q9NWW0 138 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 STEAP1Q9UHE8 339 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 ATPIF1Q9UII2 106 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 COPS3Q9UNS2 423 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 SLC6A5Q9Y345 797 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 SLC22A7Q9Y694 548 aa13.12□□□□□ -0.31
NR1H3-220ENST00000481020 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 RAB19A4D1S5 217 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 IMPA2O14732 288 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 NKX2-2O95096 273 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 ZFPL1O95159 310 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 GYPBP06028 91 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 HNRNPA1P09651 372 aaKnown RBP eCLIP13.11□□□□□ -0.31
NR1H3-220ENST00000481020 SLC25A4P12235 298 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 ZNF35P13682 527 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 SPI1P17947 270 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 POU3F2P20265 443 aaPredicted RBP13.11□□□□□ -0.31
NR1H3-220ENST00000481020 PSMD4P55036 377 aaKnown RBP13.11□□□□□ -0.31
NR1H3-220ENST00000481020 LTBQ06643 244 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 PCGF3Q3KNV8 242 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 PDSS1Q5T2R2 415 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 PGAP1Q75T13 922 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 SLC16A9Q7RTY1 509 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 ZNF595Q8IYB9 648 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 RFLNBQ8N5W9 214 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 NPEPL1Q8NDH3 523 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 HERVK_113Q902F9 699 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 TM4SF19Q96DZ7 209 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 NPAS1Q99742 590 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 NRTNQ99748 197 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 POTEKPQ9BYX7 375 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 XKR8Q9H6D3 395 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.11□□□□□ -0.31
NR1H3-220ENST00000481020 GPN3Q9UHW5 284 aaPredicted RBP13.11□□□□□ -0.31
NR1H3-220ENST00000481020 GPR160Q9UJ42 338 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 KCNE5Q9UJ90 142 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 FBXL2Q9UKC9 423 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 DAPP1Q9UN19 280 aa13.11□□□□□ -0.31
NR1H3-220ENST00000481020 MUC22E2RYF6 1773 aaPredicted RBP13.11□□□□□ -0.31
NR1H3-220ENST00000481020 TRBV5-7A0A0A0MS05 114 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 GGT3PA6NGU5 568 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 GOSR2O14653 212 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 PQBP1O60828 265 aaKnown RBP13.1□□□□□ -0.31
NR1H3-220ENST00000481020 MAOBP27338 520 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 ALKBH1Q13686 389 aaKnown RBP13.1□□□□□ -0.31
NR1H3-220ENST00000481020 CSRP2Q16527 193 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 ALG10BQ5I7T1 473 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 FCRLBQ6BAA4 426 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 NHLRC1Q6VVB1 395 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 ABHD13Q7L211 337 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 VN1R4Q7Z5H5 301 aa13.1□□□□□ -0.31
NR1H3-220ENST00000481020 LRRTM1Q86UE6 522 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms