RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CTPS2Q9NRF8 586 aa0.52□□□□□ -2.33
NCKAP1-204ENST00000477988 CWC25Q9NXE8 425 aaPredicted RBP0.52□□□□□ -2.33
NCKAP1-204ENST00000477988 H0YHG0 523 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 XKRYO14609 159 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 SF3B1O75533 1304 aaKnown RBP eCLIP0.51□□□□□ -2.331e-7■■■■■ 107
NCKAP1-204ENST00000477988 IGHDP01880 384 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 KLK3P07288 261 aaPredicted RBP0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 ABHD2P08910 425 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 C1GALT1C1LP0DN25 315 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 SOX6P35712 828 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 NCBP2P52298 156 aaKnown RBP eCLIP0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 CACNA1DQ01668 2161 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 ERCC8Q13216 396 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 SCARB2Q14108 478 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 FZD2Q14332 565 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 SMU1Q2TAY7 513 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 TTLL9Q3SXZ7 439 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 FAM78AQ5JUQ0 283 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 HES5Q5TA89 166 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 RPGRIP1LQ68CZ1 1315 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 LINC00173Q6ZV60 143 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 NLRP9Q7RTR0 991 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 TMEM159Q96B96 161 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 PAGE5Q96GU1 130 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 NARS2Q96I59 477 aaKnown RBP0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 NAP1L3Q99457 506 aaPredicted RBP0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 ALG12Q9BV10 488 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 GLRX2Q9NS18 164 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 NUDT15Q9NV35 164 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 KLHL28Q9NXS3 571 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 RDH8Q9NYR8 311 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 CD84Q9UIB8 345 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 RAB23Q9ULC3 237 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 RNF6Q9Y252 685 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 NOTCH1P46531 2555 aa0.51□□□□□ -2.33
NCKAP1-204ENST00000477988 DHX29Q7Z478 1369 aaKnown RBP0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 C12orf77C9JDV5 145 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 POLR1CO15160 346 aaPredicted RBP0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 GABARAPO95166 117 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 IGF1P05019 195 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 CSF3P09919 207 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 RALAP11233 206 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 CMA1P23946 247 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 RFC4P35249 363 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 PTGFRP43088 359 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 CYB561P49447 251 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 SLC7A9P82251 487 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 ACVR1Q04771 509 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 PDIA2Q13087 525 aaKnown RBP0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 SNX1Q13596 522 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 LDLRAP1Q5SW96 308 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 C11orf88Q6PI97 169 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 CES3Q6UWW8 571 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 HSDL2Q6YN16 418 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 WDR88Q6ZMY6 472 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 TMEM17Q86X19 198 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 OR5M1Q8NGP8 315 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 AURKBQ96GD4 344 aaPredicted RBP0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 HPDLQ96IR7 371 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 VSTM2LQ96N03 204 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 JAKMIP1Q96N16 626 aaKnown RBP0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 CCT7Q99832 543 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 RHBGQ9H310 441 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 ANO10Q9NW15 660 aa0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 TDRKHQ9Y2W6 561 aaKnown RBP0.5□□□□□ -2.33
NCKAP1-204ENST00000477988 IGHV3OR16-8A0A075B7F1 116 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 C12orf71A8MTZ7 269 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 H3BNH8 94 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 TAPBPO15533 448 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 TBX19O60806 448 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 RHOBTB1O94844 696 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 SLC25A14O95258 325 aaPredicted RBP0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 CA3P07451 260 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 HSP90AB1P08238 724 aaKnown RBP0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 GKN3PP0CG01 181 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 NPR2P20594 1047 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 TNNT3P45378 269 aaPredicted RBP0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 GSSP48637 474 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 DAP3P51398 398 aaKnown RBP0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 GPM6AP51674 278 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 IFT88Q13099 833 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 PARP15Q460N3 678 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 SAMD4BQ5PRF9 694 aaKnown RBP0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 PRMT9Q6P2P2 845 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 IQCA1Q86XH1 822 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 TMCO5AQ8N6Q1 288 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 FCGR1BQ92637 280 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 ITCHQ96J02 903 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 WFIKKN1Q96NZ8 548 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 SLC6A7Q99884 636 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 ADPGKQ9BRR6 497 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 TMEM231Q9H6L2 316 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 ZWILCHQ9H900 591 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 KCNIP1Q9NZI2 227 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 SEC14L3Q9UDX4 400 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 NUDCQ9Y266 331 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 SPACA6W5XKT8 324 aa0.49□□□□□ -2.33
NCKAP1-204ENST00000477988 ABCC4O15439 1325 aa0.48□□□□□ -2.33
NCKAP1-204ENST00000477988 C3orf84H3BNL1 204 aa0.48□□□□□ -2.33
NCKAP1-204ENST00000477988 B3GAT3O94766 335 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms