RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SARAFQ96BY9 339 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 NTNG2Q96CW9 530 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 IL4I1Q96RQ9 567 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 UBL7Q96S82 380 aaPredicted RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 NPAS1Q99742 590 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 KATNB1Q9BVA0 655 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 PTDSS2Q9BVG9 487 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 PLA2G12AQ9BZM1 189 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 VCX3AQ9NNX9 186 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 ZNF71Q9NQZ8 489 aaPredicted RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 CAMK2AQ9UQM7 478 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 RASD1Q9Y272 281 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 NOX1Q9Y5S8 564 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 IER3IP1Q9Y5U9 82 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 SPTBN4Q9H254 2564 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 WDFY3Q8IZQ1 3526 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 IRGMA1A4Y4 181 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 MAGEA13PA6NCF6 341 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 A6NIZ1 184 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 B4DXG7 233 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 PLPP3O14495 311 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 IMPA2O14732 288 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 TLX2O43763 284 aaPredicted RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 BCL10O95999 233 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 PLGP00747 810 aaPredicted RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 IGFBP1P08833 259 aaPredicted RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 FAM87AP0C7U9 286 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 IMPDH2P12268 514 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 APEHP13798 732 aaKnown RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 EPHA2P29317 976 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 SDHAP31040 664 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 UQCRC1P31930 480 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 ATP6V1E1P36543 226 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 CD97P48960 835 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 MLLT10P55197 1068 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 GFRA1P56159 465 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 RAC3P60763 192 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 RAP1BP61224 184 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 RAP1AP62834 184 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 ERVK-25P63136 954 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 POU3F1Q03052 451 aaPredicted RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 KRR1Q13601 381 aaKnown RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 MAD2L1BPQ15013 274 aaPredicted RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 BCL2A1Q16548 175 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 EMC4Q5J8M3 183 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 LCN1P1Q5VSP4 162 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 C1QL3Q5VWW1 255 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 RPUSD3Q6P087 351 aaKnown RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 DNM1P34Q6PK57 102 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 PAQR6Q6TCH4 344 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 USP51Q70EK9 711 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 P4HA3Q7Z4N8 544 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 ENTHD1Q8IYW4 607 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 LNX2Q8N448 690 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 LSM14AQ8ND56 463 aaKnown RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 BPIFB6Q8NFQ5 453 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 OR8D4Q8NGM9 314 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 MOSPD2Q8NHP6 518 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 TMEM163Q8TC26 289 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 HDAC2Q92769 488 aaKnown RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 PNPLA2Q96AD5 504 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 ZNF524Q96C55 264 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 YTHDF1Q9BYJ9 559 aaKnown RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 TSPAN10Q9H1Z9 355 aaPredicted RBP9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 CCNB1IP1Q9NPC3 277 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 RNF6Q9Y252 685 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 SNX5Q9Y5X3 404 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 NCKAP5O14513 1909 aa9.23□□□□□ -0.93
PRPF38A-202ENST00000474048 APC2O95996 2303 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 TEX13CA0A0J9YWL9 993 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 A0A1W2PNV4 684 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 SH3D21A4FU49 640 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 AQP7P3A6NL99 342 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 ZNF726A6NNF4 738 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 FTCDNL1E5RQL4 147 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 BHLHE40O14503 412 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 SURF4O15260 269 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 CXCL13O43927 109 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 PTP4A3O75365 173 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 SMNDC1O75940 238 aaKnown RBP eCLIP9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 CELA3AP09093 270 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 FCGR2AP12318 317 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 ACVR1BP36896 505 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 STARP49675 285 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 CLDN15P56746 228 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 CLDN20P56880 219 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 B3GALT5-AS1P59052 145 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 RPL27P61353 136 aaKnown RBP9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 SNRPGP62308 76 aaKnown RBP9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 FOXK1P85037 733 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 HSF1Q00613 529 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 FOXK2Q01167 660 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 TEKQ02763 1124 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 CD47Q08722 323 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 ITGADQ13349 1161 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 KLHL12Q53G59 568 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 EEF1A1P5Q5VTE0 462 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 GTF2IRD2BQ6EKJ0 949 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 THSD4Q6ZMP0 1018 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms