RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RHCEP18577 417 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 EDNRAP25101 427 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 VLDLRP98155 873 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 IL1RL1Q01638 556 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 PMS2P3Q13401 168 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 TRAM2Q15035 370 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 MS4A18Q3C1V0 323 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 MTX3Q5HYI7 312 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 CASP12Q6UXS9 341 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 STAC2Q6ZMT1 411 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 Q6ZT83 130 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 EPHX4Q8IUS5 362 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 GABRG1Q8N1C3 465 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 OR5J2Q8NH18 312 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 PFN4Q8NHR9 129 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 FAM222BQ8WU58 562 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 MCUR1Q96AQ8 359 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 TMEM45BQ96B21 275 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 FKRPQ9H9S5 495 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 NMNAT1Q9HAN9 279 aaPredicted RBP12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 CRIM1Q9NZV1 1036 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 B3GAT1Q9P2W7 334 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 MED31Q9Y3C7 131 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 ENO4A6NNW6 628 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 hCG_2039718K7EN88 272 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 PLPP3O14495 311 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 DNAJC8O75937 253 aaPredicted RBP12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 OR6A2O95222 327 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 ADAP00813 363 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 IGF2P01344 180 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 IGHV3-9P01782 118 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 SEMG1P04279 462 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 HIST1H2ABP04908 130 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 EPXP11678 715 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 ITGA2P17301 1181 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 ATP6V1B2P21281 511 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 FUT4P22083 530 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 RASSF2P50749 326 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 C1DQ13901 141 aaKnown RBP12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 P2RY6Q15077 328 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 FBXW9Q5XUX1 488 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 LCN8Q6JVE9 175 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 HIST3H2AQ7L7L0 130 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 AAED1Q7RTV5 226 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 CXorf67Q86X51 503 aaPredicted RBP12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 ZNF295-AS1Q8N0V1 137 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 UBE2J2Q8N2K1 259 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 LRRC17Q8N6Y2 441 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 PIK3C3Q8NEB9 887 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 HIST1H2ACQ93077 130 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 CCDC124Q96CT7 223 aaKnown RBP12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 ASB9Q96DX5 294 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 SGTBQ96EQ0 304 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 DACH2Q96NX9 599 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 HDHD5Q9BXW7 423 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 MAN2C1Q9NTJ4 1040 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 C20orf141Q9NUB4 165 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 ZNF229Q9UJW7 825 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
SQSTM1-205ENST00000464493 CACNA1DQ01668 2161 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 SH3D21A4FU49 640 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 HTR3EA5X5Y0 456 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 STAMBPO95630 424 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 HPRP00739 348 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 H1F0P07305 194 aaKnown RBP12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 ASAH2BP0C7U1 165 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 ADORA3P0DMS8 318 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 UMPSP11172 480 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 FUT1P19526 365 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 PSMB1P20618 241 aaKnown RBP12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 AHCYP23526 432 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 CCKARP32238 428 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 PUDPQ08623 228 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 TRAP1Q12931 704 aaKnown RBP12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 ITGADQ13349 1161 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 IQCCQ4KMZ1 466 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 SFRP5Q5T4F7 317 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 ANKRD34AQ69YU3 496 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 PGM2L1Q6PCE3 622 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 SLC46A3Q7Z3Q1 461 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 PXKQ7Z7A4 578 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 UEVLDQ8IX04 471 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 RNF113BQ8IZP6 322 aaKnown RBP12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 ACOT11Q8WXI4 607 aaPredicted RBP12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 POP5Q969H6 163 aaKnown RBP12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 C14orf79Q96F83 325 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 LRGUKQ96M69 825 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 WFIKKN1Q96NZ8 548 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 PIP5K1AQ99755 562 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 ANKRD19PQ9H560 264 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 IL1RAPQ9NPH3 570 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 UPB1Q9UBR1 384 aa12.83□□□□□ -0.36
SQSTM1-205ENST00000464493 ITPR2Q14571 2701 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 A0A087WUU8 490 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 A0A1W2PRQ8 180 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 TCRBV5S2A0A599 114 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 ACOT8O14734 319 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 GSC2O15499 205 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 PIP5K1CO60331 668 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 OR7A10O76100 309 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms