RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 GALNT9Q9HCQ5 603 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 EMC7Q9NPA0 242 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 MMP25Q9NPA2 562 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 PNO1Q9NRX1 252 aaKnown RBP9.51□□□□□ -0.89
CD44-210ENST00000434472 LANCL2Q9NS86 450 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 CUTCQ9NTM9 273 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 MCUBQ9NWR8 336 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 PTTG3PQ9NZH4 202 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 EMC3Q9P0I2 261 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 ING4Q9UNL4 249 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 PCDHGA9Q9Y5G4 932 aaKnown RBP9.51□□□□□ -0.89
CD44-210ENST00000434472 MAU2Q9Y6X3 613 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 SCN2AQ99250 2005 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 A0A1W2PQD3 144 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 NAP1L6A6NFF2 107 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 METTL12A8MUP2 240 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 BLOC1S5-TXNDC5H3BN57 136 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 AIPO00170 330 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 ECDO95905 644 aaPredicted RBP9.5□□□□□ -0.89
CD44-210ENST00000434472 TCRBP04435 133 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 ASAH2BP0C7U1 165 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 CALCBP10092 127 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 TFPIP10646 304 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 STOMP27105 288 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 UQCRC1P31930 480 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 BTCP35070 178 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 PSMB10P40306 273 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 CDKN2AP42771 156 aaKnown RBP9.5□□□□□ -0.89
CD44-210ENST00000434472 CCR4P51679 360 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 AP3S2P59780 193 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 MRPS10P82664 201 aaKnown RBP9.5□□□□□ -0.89
CD44-210ENST00000434472 SRSF5Q13243 272 aaKnown RBP9.5□□□□□ -0.89
CD44-210ENST00000434472 ZNF684Q5T5D7 378 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 FAM69AQ5T7M9 428 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 CD276Q5ZPR3 534 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 LYPD4Q6UWN0 246 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 FAM122BQ7Z309 247 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 NANOGNBQ7Z5D8 188 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 ZSCAN1Q8NBB4 408 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 LSM14AQ8ND56 463 aaKnown RBP9.5□□□□□ -0.89
CD44-210ENST00000434472 ZNF563Q8TA94 476 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 SMIM4Q8WVI0 70 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 SCMH1Q96GD3 660 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 GFM1Q96RP9 751 aaKnown RBP9.5□□□□□ -0.89
CD44-210ENST00000434472 YIPF2Q9BWQ6 316 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 FKRPQ9H9S5 495 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 NOX4Q9NPH5 578 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 GRHPRQ9UBQ7 328 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 AK6Q9Y3D8 172 aaKnown RBP9.5□□□□□ -0.89
CD44-210ENST00000434472 TMEM14AQ9Y6G1 99 aa9.5□□□□□ -0.89
CD44-210ENST00000434472 A0A0A6YYJ9 748 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 IGHV5-51A0A0C4DH38 117 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 A0A1W2PPK0 400 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 RHPN2P1A8MT19 583 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 MAGEB4O15481 346 aaPredicted RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 OIP5O43482 229 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 WNT1P04628 370 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 RAB40ALP0C0E4 278 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 CENPAP49450 140 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 ARL4DP49703 201 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 HNRNPKP61978 463 aaKnown RBP eCLIP9.49□□□□□ -0.89
CD44-210ENST00000434472 RACK1P63244 317 aaKnown RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 RIPPLY1Q0D2K3 151 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 DBPQ10586 325 aaPredicted RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 ALKBH1Q13686 389 aaKnown RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 ELAVL1Q15717 326 aaKnown RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 CD226Q15762 336 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 C14orf28Q4W4Y0 310 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 SNAP47Q5SQN1 464 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 HLA-DQA1Q5Y7H0 255 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 CREB3L2Q70SY1 520 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 ZNF767PQ75MW2 155 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 BTN2A1Q7KYR7 527 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 LUZP2Q86TE4 346 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 CDC20BQ86Y33 519 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 SIAH3Q8IW03 269 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 METTL27Q8N6F8 245 aaPredicted RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 DTX3Q8N9I9 347 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 GATSQ8NAP1 163 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 CADM4Q8NFZ8 388 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 OR5AK2Q8NH90 309 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 LGALS14Q8TCE9 139 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 ZNRF4Q8WWF5 429 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 RAB40AQ8WXH6 277 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 KLHL15Q96M94 604 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 ZFP3Q96NJ6 502 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 DERL3Q96Q80 235 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 CACNG6Q9BXT2 260 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 ADAM19Q9H013 955 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 NXF5Q9H1B4 397 aaKnown RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 GHITMQ9H3K2 345 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 PLSCR3Q9NRY6 295 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 BOLA1Q9Y3E2 137 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 V9GY05 133 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 TRANK1O15050 2925 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 IGKV3D-11A0A0A0MRZ8 115 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 A0A1B0GVC2 190 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 A6NIN4 97 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms