RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ZNF385AQ96PM9 386 aaKnown RBP15.92■□□□□ 0.14
SEMA3B-201ENST00000416295 PRSS27Q9BQR3 290 aa15.92■□□□□ 0.14
SEMA3B-201ENST00000416295 POLDIP3Q9BY77 421 aaKnown RBP15.92■□□□□ 0.14
SEMA3B-201ENST00000416295 CLEC4MQ9H2X3 399 aaPredicted RBP15.92■□□□□ 0.14
SEMA3B-201ENST00000416295 CD300AQ9UGN4 299 aa15.92■□□□□ 0.14
SEMA3B-201ENST00000416295 SAMD4AQ9UPU9 718 aaKnown RBP15.92■□□□□ 0.14
SEMA3B-201ENST00000416295 PDZD2O15018 2839 aa15.92■□□□□ 0.14
SEMA3B-201ENST00000416295 CCDC168Q8NDH2 2452 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 B2RBV5 119 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 IGHV3-9P01782 118 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 CBLP22681 906 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 CRYGSP22914 178 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 IL1RL1Q01638 556 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 PMS2P3Q13401 168 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 BHLHA15Q7RTS1 189 aaPredicted RBP15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 POMGNT2Q8NAT1 580 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 FAM156AQ8NDB6 213 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 S100PBPQ96BU1 408 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 ZC3HAV1LQ96H79 300 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 AMBRA1Q9C0C7 1298 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 GORASP2Q9H8Y8 452 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 FKRPQ9H9S5 495 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 DCAF13Q9NV06 445 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 B3GAT1Q9P2W7 334 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 UPB1Q9UBR1 384 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 SEC14L4Q9UDX3 406 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 RCE1Q9Y256 329 aa15.91■□□□□ 0.14
SEMA3B-201ENST00000416295 POLQO75417 2590 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 OR6C65A6NJZ3 312 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 KPNA4O00629 521 aaPredicted RBP15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 AKAP8O43823 692 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 LYZL6O75951 148 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 IGHV1-2P23083 117 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 KRTAP10-9P60411 292 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 LTBQ06643 244 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 PUDPQ08623 228 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 ZNF74Q16587 644 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 SSX8Q7RTT4 187 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 TRPM8Q7Z2W7 1104 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 ABHD12BQ7Z5M8 362 aaPredicted RBP15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 EPHX4Q8IUS5 362 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 ARHGAP24Q8N264 748 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 KDM8Q8N371 416 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 RBM15BQ8NDT2 890 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 OR5J2Q8NH18 312 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 TMEM239Q8WW34 195 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 SLCO5A1Q9H2Y9 848 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 NANSQ9NR45 359 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 TAS2R16Q9NYV7 291 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 A4GNTQ9UNA3 340 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 SNX13Q9Y5W8 968 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 MPDZO75970 2070 aa15.9■□□□□ 0.14
SEMA3B-201ENST00000416295 LRRN3E7EW58 273 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 CH25HO95992 272 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 IGF2P01344 180 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 MT-ND1P03886 318 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 HRGP04196 525 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 DNAJA1P31689 397 aaKnown RBP15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 CLDN17P56750 224 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 FAPQ12884 760 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 TSC22D1Q15714 1073 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 TSPO2Q5TGU0 170 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 CYP4Z1Q86W10 505 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 NKAIN4Q8IVV8 208 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 UEVLDQ8IX04 471 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 OFCC1Q8IZS5 231 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 ZNF433Q8N7K0 673 aaPredicted RBP15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 TMEM255BQ8WV15 326 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 HSD17B8Q92506 261 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 FNDC11Q9BVV2 318 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 SLC7A10Q9NS82 523 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 ZNF229Q9UJW7 825 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 MED31Q9Y3C7 131 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 NOX1Q9Y5S8 564 aa15.89■□□□□ 0.13
SEMA3B-201ENST00000416295 ANKRD17O75179 2603 aaKnown RBP15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 DEFB108AA8MXU0 73 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 MS4A18H0YCH9 400 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 PLPP3O14495 311 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 ARPC2O15144 300 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 KRT33AO76009 404 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 OR6A2O95222 327 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 HIST1H2ABP04908 130 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 THBDP07204 575 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 T-ENOLP0DO92 83 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 TGFBR3Q03167 851 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 MS4A18Q3C1V0 323 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 NIPAL3Q6P499 406 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 C22orf34Q6ZV56 151 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 HIST3H2AQ7L7L0 130 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 P2RY8Q86VZ1 359 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 HIST1H2ACQ93077 130 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 NSMCE2Q96MF7 247 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 NGBQ9NPG2 151 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 MEPEQ9NQ76 525 aaPredicted RBP15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 ENPP4Q9Y6X5 453 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 CSMD2Q7Z408 3487 aa15.88■□□□□ 0.13
SEMA3B-201ENST00000416295 CIB4A0PJX0 185 aa15.87■□□□□ 0.13
SEMA3B-201ENST00000416295 HTR3EA5X5Y0 456 aa15.87■□□□□ 0.13
SEMA3B-201ENST00000416295 PDLIM1O00151 329 aa15.87■□□□□ 0.13
SEMA3B-201ENST00000416295 TRAF3IP2O43734 574 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms