RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 POU3F1Q03052 451 aaPredicted RBP13.02□□□□□ -0.33
COL4A3-202ENST00000396578 MMP21Q8N119 569 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 J3KTA2 159 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 TXNDC12O95881 172 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 HPNP05981 417 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 COL9A2Q14055 689 aaPredicted RBP13.02□□□□□ -0.33
COL4A3-202ENST00000396578 MRPL2Q5T653 305 aaKnown RBP13.02□□□□□ -0.33
COL4A3-202ENST00000396578 NPSR1Q6W5P4 371 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 SLC43A1O75387 559 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 HNRNPA2B1P22626 353 aaKnown RBP13.01□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF91Q05481 1191 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 PIGMQ9H3S5 423 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 URGCP-MRPS24S4R325 110 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 TRBV4-1A0A0J9YWV2 114 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF593O00488 134 aaPredicted RBP13.01□□□□□ -0.33
COL4A3-202ENST00000396578 AP1G1O43747 822 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 OR10J4P0C629 311 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 RANBP10Q6VN20 620 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF566Q969W8 418 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 SORBS1Q9BX66 1292 aaKnown RBP13.01□□□□□ -0.33
COL4A3-202ENST00000396578 CLEC3BP05452 202 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 HTR5AP47898 357 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 TSPAN31Q12999 210 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 SNTB1Q13884 538 aaKnown RBP13.01□□□□□ -0.33
COL4A3-202ENST00000396578 LTC4SQ16873 150 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 ULBP2Q9BZM5 246 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 NKX6-2Q9C056 277 aaPredicted RBP13.01□□□□□ -0.33
COL4A3-202ENST00000396578 SH3BGRL2Q9UJC5 107 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 CA14Q9ULX7 337 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 ANKRD36CQ5JPF3 1778 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 ZFP92A6NM28 416 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 PHF1O43189 567 aaPredicted RBP13.01□□□□□ -0.33
COL4A3-202ENST00000396578 KCNK5O95279 499 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 GASTP01350 101 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 TMEM11P17152 192 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 FAM74A1Q5RGS3 127 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 STARD5Q9NSY2 213 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 TRBV11-1A0A0K0K1C0 115 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 J3QR89 54 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 C1orf105O95561 183 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 HBA1P69905 142 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 HOXC5Q00444 222 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF836Q6ZNA1 936 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 TCTN2Q96GX1 697 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 REEP6Q96HR9 211 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 SEC22CQ9BRL7 303 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 ASCC3Q8N3C0 2202 aaKnown RBP13.01□□□□□ -0.33
COL4A3-202ENST00000396578 TMEM235A6NFC5 223 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 LAMTOR5O43504 91 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 PMS2P2O95744 297 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 PMP2P02689 132 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 CD63P08962 238 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 OR2G6Q5TZ20 316 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 STEAP1BQ6NZ63 245 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 MOKQ9UQ07 419 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 CAMTA1Q9Y6Y1 1673 aa13.01□□□□□ -0.33
COL4A3-202ENST00000396578 SMLR1H3BR10 107 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF728P0DKX0 622 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF133P52736 654 aaPredicted RBP13□□□□□ -0.33
COL4A3-202ENST00000396578 RPS25P62851 125 aaKnown RBP13□□□□□ -0.33
COL4A3-202ENST00000396578 DSC1Q08554 894 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 EXOSC7Q15024 291 aaKnown RBP13□□□□□ -0.33
COL4A3-202ENST00000396578 HENMT1Q5T8I9 393 aaKnown RBP13□□□□□ -0.33
COL4A3-202ENST00000396578 OR13C2Q8NGS9 318 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 OR10Z1Q8NGY1 313 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 MED20Q9H944 212 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 NPIPB15A6NHN6 443 aaPredicted RBP13□□□□□ -0.33
COL4A3-202ENST00000396578 PDGFAP04085 211 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 GDF1P27539 372 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 MTNR1BP49286 362 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 BRI3BPQ8WY22 251 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 RNF32Q9H0A6 362 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 NOX4Q9NPH5 578 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 CBY1Q9Y3M2 126 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 DEFA4P12838 97 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 ERVFC1P60507 584 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 RUNX3Q13761 415 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 CBARPQ8N350 705 aaPredicted RBP13□□□□□ -0.33
COL4A3-202ENST00000396578 KCNG3Q8TAE7 436 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 WDR76Q9H967 626 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 ZNF891A8MT65 544 aaPredicted RBP13□□□□□ -0.33
COL4A3-202ENST00000396578 SUSD5O60279 629 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 LALBAP00709 142 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 NAGAP17050 411 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 ITGB7P26010 798 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 Q6ZTK2 550 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 SEMA6DQ8NFY4 1073 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 OR8U1Q8NH10 309 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 KLK4Q9Y5K2 254 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 SIX6O95475 246 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 CHST14Q8NCH0 376 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 PRRC2BQ5JSZ5 2229 aaKnown RBP13□□□□□ -0.33
COL4A3-202ENST00000396578 ACOD1A6NK06 481 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 TMEM200CA6NKL6 621 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 SIRPAP78324 504 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 DUSP6Q16828 381 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 TIGD3Q6B0B8 471 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 C10orf90Q96M02 699 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 FAM173AQ9BQD7 235 aa13□□□□□ -0.33
COL4A3-202ENST00000396578 SLC25A21Q9BQT8 299 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms