RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 GHSRQ92847 366 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ITFG2Q969R8 447 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 SORCS2Q96PQ0 1159 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 CDC6Q99741 560 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 GABRG3Q99928 467 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ZNF471Q9BX82 626 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ABRACLQ9P1F3 81 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 KLK4Q9Y5K2 254 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 FUOMA2VDF0 154 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 IDSB3KWA1 339 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 SLC26A5P58743 744 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 TIAL1Q01085 375 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 GRINAQ7Z429 371 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 C16orf52Q8NHV5 167 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 FER1L6-AS2Q96M78 137 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 OR2A14Q96R47 310 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ENY2Q9NPA8 101 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 NUDT21O43809 227 aaKnown RBP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 TSPAN9O75954 239 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 SERPINA5P05154 406 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 GABRR1P24046 479 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 EMDP50402 254 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 C1orf198Q9H425 327 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 PLEKHJ1Q9NW61 149 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 NDRG4Q9ULP0 352 aaKnown RBP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 CD14P08571 375 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ENPP1P22413 925 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 NR4A2P43354 598 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 CARD18P57730 90 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 EIF4EBP2Q13542 120 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 DPY19L4Q7Z388 723 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 CAMKMTQ7Z624 323 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 STT3BQ8TCJ2 826 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 SP7Q8TDD2 431 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ARSGQ96EG1 525 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 NXF5Q9H1B4 397 aaKnown RBP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 BCL2L10Q9HD36 194 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 GPRIN2O60269 458 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 JUNBP17275 347 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ECH1Q13011 328 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 EIF5AL1Q6IS14 154 aaKnown RBP15.26■□□□□ 0.03
SCN3B-202ENST00000392770 ABHD4Q8TB40 342 aa15.26■□□□□ 0.03
SCN3B-202ENST00000392770 PRKNO60260 465 aaPredicted RBP15.25■□□□□ 0.03
SCN3B-202ENST00000392770 LIPAP38571 399 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 RRADP55042 308 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 SYT14P1Q58G82 188 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 AAED1Q7RTV5 226 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 LINC00346Q8IVM7 164 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 BEST3Q8N1M1 668 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 MORN4Q8NDC4 146 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 LOC285556D6RIA3 1793 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 TTC3P53804 2025 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 ZC3H12DA2A288 527 aaKnown RBP15.25■□□□□ 0.03
SCN3B-202ENST00000392770 MT-ATP6P00846 226 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 MT-ND4P03905 459 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 AKAIN1P0CW23 69 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 EVI2BP34910 448 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 YBX1P67809 324 aaKnown RBP15.25■□□□□ 0.03
SCN3B-202ENST00000392770 SLC35D3Q5M8T2 416 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 SYT6Q5T7P8 510 aaPredicted RBP15.25■□□□□ 0.03
SCN3B-202ENST00000392770 SLC16A14Q7RTX9 510 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 PXKQ7Z7A4 578 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 LINC01555Q8NAE3 123 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 COQ8AQ8NI60 647 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 BRIX1Q8TDN6 353 aaKnown RBP15.25■□□□□ 0.03
SCN3B-202ENST00000392770 TM9SF4Q92544 642 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 DNTTIP1Q9H147 329 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 NRIP3Q9NQ35 241 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 KLHL13Q9P2N7 655 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 NOSIPQ9Y314 301 aaKnown RBP15.25■□□□□ 0.03
SCN3B-202ENST00000392770 MAB21L2Q9Y586 359 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 LILRA5A6NI73 299 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 EEF1E1-BLOC1S5C9J1V9 151 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 DOK2O60496 412 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 ALDH3B2P48448 385 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 FZD2Q14332 565 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 FAM69AQ5T7M9 428 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 COX14Q96I36 57 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 OR2B2Q9GZK3 357 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 PAQR5Q9NXK6 330 aaPredicted RBP15.25■□□□□ 0.03
SCN3B-202ENST00000392770 HBMQ6B0K9 141 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 ZNF547Q8IVP9 402 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 C8orf44Q96CB5 159 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 CORINQ9Y5Q5 1042 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 WDR90Q96KV7 1748 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 HMGB3O15347 200 aaKnown RBP15.25■□□□□ 0.03
SCN3B-202ENST00000392770 PAPLNO95428 1278 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 RAB3DO95716 219 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 MSX1P28360 303 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 PPICP45877 212 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 TSC22D1Q15714 1073 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 THOC3Q96J01 351 aaKnown RBP15.25■□□□□ 0.03
SCN3B-202ENST00000392770 KCNIP1Q9NZI2 227 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 KCND3Q9UK17 655 aa15.25■□□□□ 0.03
SCN3B-202ENST00000392770 ANKRD12Q6UB98 2062 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 TDRD15B5MCY1 1934 aaKnown RBP15.24■□□□□ 0.03
SCN3B-202ENST00000392770 PLXNA1Q9UIW2 1896 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 NAP1L6A6NFF2 107 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 PPM1DO15297 605 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 GCH1P30793 250 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms