RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TSPAN7P41732 249 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 OR1D4P47884 311 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 DHPSP49366 369 aaPredicted RBP7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 DAP3P51398 398 aaKnown RBP7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 NR0B1P51843 470 aaKnown RBP7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 EMP2P54851 167 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 ERV3-1Q14264 604 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 SF3A2Q15428 464 aaKnown RBP7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 SHBQ15464 509 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 HLA-BQ31612 363 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 ACSM3Q53FZ2 586 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 TEX30Q5JUR7 227 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 PERM1Q5SV97 790 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC35F1Q5T1Q4 408 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 EEF1A1P5Q5VTE0 462 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 NKAIN2Q5VXU1 208 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 TRIQKQ629K1 86 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 FAAH2Q6GMR7 532 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 PYHIN1Q6K0P9 492 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC23A3Q6PIS1 610 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 PAQR6Q6TCH4 344 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 ANKRD37Q7Z713 158 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 ZBTB46Q86UZ6 589 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 C9orf40Q8IXQ3 194 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 OR8H2Q8N162 312 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 AGBL5Q8NDL9 886 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 DUSP18Q8NEJ0 188 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 NFAM1Q8NET5 270 aaPredicted RBP7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 MRGPRX4Q96LA9 322 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 DEPDC7Q96QD5 511 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 ATF6BQ99941 703 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 KCNS3Q9BQ31 491 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 NEURL2Q9BR09 285 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 RBCK1Q9BYM8 510 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 TXNIPQ9H3M7 391 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 PPP1R3EQ9H7J1 279 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 ABCB9Q9NP78 766 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 RPRD1BQ9NQG5 326 aaKnown RBP7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 INIPQ9NRY2 104 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 CYSLTR2Q9NS75 346 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 TAS2R10Q9NYW0 307 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 VSX1Q9NZR4 365 aaPredicted RBP7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 KCNG2Q9UJ96 466 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 B3GALT5Q9Y2C3 310 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 SLCO1B1Q9Y6L6 691 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 MAU2Q9Y6X3 613 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 SCN3AQ9NY46 2000 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 BRWD1Q9NSI6 2320 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 LOC102723996A0A087X1L8 192 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TRBV2A0A0J9YWF9 115 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 IGHV5-10-1A0A0J9YXX1 117 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 FAM183AA6NL82 134 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TMEM212A6NML5 194 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 IDSB3KWA1 339 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 MCIDASD6RGH6 385 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 J3QL48 77 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 J3QLW9 94 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 SDC3O75056 442 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ICOSLGO75144 302 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 DLGAP3O95886 979 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 BGLAPP02818 100 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 HRGP04196 525 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 CTSBP07858 339 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 RAB40ALP0C0E4 278 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC2A2P11168 524 aaPredicted RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 IL7P13232 177 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF19P17023 458 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 RAB3BP20337 219 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ITPKBP27987 946 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 CCKBRP32239 447 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 PYCR1P32322 319 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 MNDAP41218 407 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 INPP1P49441 399 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 RAG2P55895 527 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 CTXN1P60606 82 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 GPR85P60893 370 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 RPL27P61353 136 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ZXDAP98168 799 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 IFITM3Q01628 133 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF85Q03923 595 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF117Q03924 483 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TOMM20Q15388 145 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 CD226Q15762 336 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF239Q16600 458 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF791Q3KP31 576 aaPredicted RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ZMAT1Q5H9K5 638 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 MRPL14Q6P1L8 145 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TMEM91Q6ZNR0 172 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 CPEB2Q7Z5Q1 589 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 CEACAM19Q7Z692 300 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 RAB43Q86YS6 212 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ARMC10Q8N2F6 343 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 DEFB119Q8N690 84 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 C10orf53Q8N6V4 93 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 BBS1Q8NFJ9 593 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 OR4K13Q8NH42 304 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF417Q8TAU3 575 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 GPR119Q8TDV5 335 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 RAB40AQ8WXH6 277 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms