RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CEBPBP17676 345 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 FADDQ13158 208 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 APCDD1Q8J025 514 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 OR5W2Q8NH69 310 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 MOB1AQ9H8S9 216 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 LRRC42Q9Y546 428 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 COL1A1P02452 1464 aaPredicted RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 SLC22A31A6NKX4 558 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 DRGXA6NNA5 263 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 FRS3O43559 492 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 GM2AP17900 193 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 ZNF169Q14929 603 aaPredicted RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 PDZD11Q5EBL8 140 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 SERINC5Q86VE9 423 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 ADAMTS18Q8TE60 1221 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 MRPS24Q96EL2 167 aaKnown RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 ZNF331Q9NQX6 463 aaPredicted RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 SIGLEC1Q9BZZ2 1709 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 ZNF320A2RRD8 509 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 TFP02787 698 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 HOXC5Q00444 222 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 EBPQ15125 230 aaKnown RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 PPP1R3AQ16821 1122 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 PHLDA2Q53GA4 152 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 RABL3Q5HYI8 236 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 SIAH1Q8IUQ4 282 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 SLC24A4Q8NFF2 622 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 RAB7BQ96AH8 199 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 VPS25Q9BRG1 176 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 DHRS4Q9BTZ2 278 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 SLC6A5Q9Y345 797 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 MROH6A6NGR9 719 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 SIRPB1O00241 398 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 FUT1P19526 365 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 SOX4Q06945 474 aaPredicted RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 CLEC12BQ2HXU8 276 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 IDO2Q6ZQW0 420 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 ARL6IP6Q8N6S5 226 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 RFXAPO00287 272 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 SEMG1P04279 462 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 DRD1P21728 446 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 SSTR4P31391 388 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 VEGFBP49765 207 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 ACTBP60709 375 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 ACTG1P63261 375 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 GAMTQ14353 236 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 PEA15Q15121 130 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 FRMD1Q8N878 549 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 NKD2Q969F2 451 aaPredicted RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 H3BNC9 293 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 F13BP05160 661 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 PRSS3P35030 304 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 MGAT3Q09327 533 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 BTNL3Q6UXE8 466 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 SLC39A5Q6ZMH5 540 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 VWA5B2Q8N398 1253 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 OR5AR1Q8NGP9 310 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 ZFAND2BQ8WV99 257 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 GGHQ92820 318 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 PCYT2Q99447 389 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 SELENOIQ9C0D9 397 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 PRSS51A0A1B0GVH4 220 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 FAM181BA6NEQ2 426 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 PHF1O43189 567 aaPredicted RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 PTBP3O95758 552 aaKnown RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 PMP2P02689 132 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 EBLN1P0CF75 366 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 CPEP16870 476 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 DTYMKP23919 212 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 NDUFAF5Q5TEU4 345 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 CYP4V2Q6ZWL3 525 aaPredicted RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 IGDCC3Q8IVU1 814 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 SLC7A5P1Q8MH63 180 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 KDM8Q8N371 416 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 IGSF8Q969P0 613 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 MUL1Q969V5 352 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 IGSF21Q96ID5 467 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 TGIF2Q9GZN2 237 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 OR51E2Q9H255 320 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 ELOVL3Q9HB03 270 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 ZNF71Q9NQZ8 489 aaPredicted RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 HCFC1R1Q9NWW0 138 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 TRAPPC4Q9Y296 219 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 IL7P13232 177 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 BMI1P35226 326 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 ZNF385BQ569K4 471 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 FAM198BQ6UWH4 519 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 TGIF2LXQ8IUE1 241 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 CNTN4Q8IWV2 1026 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 FGGYQ96C11 551 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 CPPED1Q9BRF8 314 aaPredicted RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 DNMT3BQ9UBC3 853 aaKnown RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 NXT1Q9UKK6 140 aaKnown RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 PROCRQ9UNN8 238 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 PIGLQ9Y2B2 252 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 ZNF142P52746 1687 aaPredicted RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 A0A096LPI6 279 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 POM121CA8CG34 1229 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 SCGB1A1P11684 91 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 NAT1P18440 290 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms