RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ZNF229Q9UJW7 825 aa9.76□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ING1Q9UK53 422 aaPredicted RBP9.76□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 FLNCQ14315 2725 aa9.76□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SPTAN1Q13813 2472 aaKnown RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 HTR3EA5X5Y0 456 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 LRRN3E7EW58 273 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 C11orf98E9PRG8 122 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 C16orf97H3BN30 126 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 RNF13O43567 381 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 FZD7O75084 574 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 KRT33AO76009 404 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 OR7A10O76100 309 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 CNOT4O95628 575 aaKnown RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 IGF2P01344 180 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ADORA3P0DMS8 318 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SAGP10523 405 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 IFI30P13284 250 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 IGFBP2P18065 325 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 AHCYP23526 432 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 IL32P24001 234 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PCYT1AP49585 367 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 P2RY4P51582 365 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 VLDLRP98155 873 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 POU3F1Q03052 451 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 TRAP1Q12931 704 aaKnown RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SNTB1Q13884 538 aaKnown RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 FLOT2Q14254 428 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 FAM98BQ52LJ0 330 aaKnown RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 NIPAL3Q6P499 406 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 Q6ZT83 130 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ABHD12BQ7Z5M8 362 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ZDHHC21Q8IVQ6 265 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ACOT11Q8WXI4 607 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ZNF347Q96SE7 839 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SEPHS2Q99611 448 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PIP5K1AQ99755 562 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 MAGIXQ9H6Y5 334 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 MCCC2Q9HCC0 563 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 MEPEQ9NQ76 525 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 NDUFAF4Q9P032 175 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SEC14L4Q9UDX3 406 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 KCNN3Q9UGI6 736 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PRSS50Q9UI38 385 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PTPN13Q12923 2485 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PKDREJQ9NTG1 2253 aa9.75□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SH3D21A4FU49 640 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 OR6C65A6NJZ3 312 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 EBAG9O00559 213 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 FFAR1O14842 300 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 CASKO14936 926 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PIP5K1CO60331 668 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SERPINI2O75830 405 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 DIRAS1O95057 198 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PRSS23O95084 383 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 GADD45GO95257 159 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ADAP00813 363 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 IGHV3-9P01782 118 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SEMG1P04279 462 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PPP3CBP16298 524 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 UGT2B10P36537 528 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 CLDN17P56750 224 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 CHRNB3Q05901 458 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 LTBQ06643 244 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 FAM27E3Q08E93 113 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 TAF11Q15544 211 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 FBXW9Q5XUX1 488 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 FBXW10Q5XX13 1052 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 CREB3L2Q70SY1 520 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SLC46A3Q7Z3Q1 461 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 CXorf67Q86X51 503 aaPredicted RBP9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 RNF113BQ8IZP6 322 aaKnown RBP9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 KDM8Q8N371 416 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 POMGNT2Q8NAT1 580 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PIK3C3Q8NEB9 887 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 STEAP2Q8NFT2 490 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 KISS1RQ969F8 398 aaPredicted RBP9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 C7orf34Q96L11 122 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ZNF385AQ96PM9 386 aaKnown RBP9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 MED18Q9BUE0 208 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 NDEL1Q9GZM8 345 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SLCO5A1Q9H2Y9 848 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 NMNAT1Q9HAN9 279 aaPredicted RBP9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 IL1RAPQ9NPH3 570 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ASB6Q9NWX5 421 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 RCE1Q9Y256 329 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 TMEM5Q9Y2B1 443 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 GPR52Q9Y2T5 361 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 TESMINQ9Y4I5 508 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 NOX1Q9Y5S8 564 aa9.74□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 A0A1W2PRQ8 180 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 TCRBV5S2A0A599 114 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 AQP12BA6NM10 295 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 MCIDASD6RGH6 385 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ZNF587BE7ETH6 402 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 BLOC1S5-TXNDC5H3BN57 136 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 PLPP3O14495 311 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 GSC2O15499 205 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 SLC43A1O75387 559 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 ASAH2BP0C7U1 165 aa9.73□□□□□ -0.85
CSPG4P2Y-201ENST00000306853 HOXB6P17509 224 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms