RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 UHRF1Q96T88 793 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PLEKHF2Q9H8W4 249 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 MARCH4Q9P2E8 410 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 NINQ8N4C6 2090 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TCRBV7S3A2A0A539 114 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 AP1G1O43747 822 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TPPPO94811 219 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 NDUFB7P17568 137 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ANXA7P20073 488 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SERPINA2P20848 420 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CNR2P34972 360 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CAPZBP47756 277 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ARSDP51689 593 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 RPL11P62913 178 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SIRPAP78324 504 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 GABREP78334 506 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF74Q16587 644 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM41BQ5BJD5 291 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 C9orf152Q5JTZ5 239 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 VASNQ6EMK4 673 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ANKRD54Q6NXT1 300 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF585AQ6P3V2 769 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CFAP77Q6ZQR2 320 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 GPRIN1Q7Z2K8 1008 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 GRINAQ7Z429 371 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 EDARADDQ8WWZ3 215 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 OR2A14Q96R47 310 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 DHRS4Q9BTZ2 278 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 KCNK12Q9HB15 430 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 HEYLQ9NQ87 328 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 STARD5Q9NSY2 213 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 VSX1Q9NZR4 365 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM181Q9P2C4 612 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 NUMBLQ9Y6R0 609 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CCDC88AQ3V6T2 1871 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PRAMEF25A6NGN4 478 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 J3QR89 54 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PCMT1P22061 227 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 FUT4P22083 530 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ARR3P36575 388 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ETV5P41161 510 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PIN1Q13526 163 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CTU2Q2VPK5 515 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 C2orf76Q3KRA6 126 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 HEPHL1Q6MZM0 1159 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 RFPL4BQ6ZWI9 263 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 OR52R1Q8NGF1 315 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 OR51L1Q8NGJ5 315 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF845Q96IR2 970 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZBED3Q96IU2 234 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PCYT2Q99447 389 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 NIPSNAP3BQ9BS92 247 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ANKRD60Q9BZ19 345 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 LYRM4Q9HD34 91 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ASF1BQ9NVP2 202 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SALL4Q9UJQ4 1053 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 V9GY05 133 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 K7EPK0 472 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ARPC1BO15143 372 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 AIFM1O95831 613 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CLDN1O95832 211 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SLURP2P0DP57 97 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 NFYBP25208 207 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 HOXA11P31270 313 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 APOBEC1P41238 236 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 GABRA4P48169 554 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CDKN2DP55273 166 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TAS2R45P59539 299 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TDHQ8IZJ6 230 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 FAM71E2Q8N5Q1 922 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 KHSRPQ92945 711 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM106AQ96A25 262 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 RAB3CQ96E17 227 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 COMMD5Q9GZQ3 224 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SYNPO2LQ9H987 977 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 DCAF13Q9NV06 445 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 GJD2Q9UKL4 321 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF443Q9Y2A4 671 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 A0A087WZY1 265 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 IGKV6D-21A0A0A0MT36 114 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 HIDE1A8MVS5 230 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 M0R3H8 397 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 UBL3O95164 117 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 STSP08842 583 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PRSS56P0CW18 603 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SDC1P18827 310 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 IMPA1P29218 277 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PRDX3P30048 256 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 RAD52P43351 418 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 EDDM3BP56851 147 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 MGAT3Q09327 533 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 FAPQ12884 760 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PLA2G7Q13093 441 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 MYBPHQ13203 477 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TIGITQ495A1 244 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PXDC1Q5TGL8 231 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ELP2Q6IA86 826 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 IGFN1Q86VF2 1251 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 NPWQ8N729 165 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms