RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ankrd53Q3V0J4 497 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tnfaip3Q60769 775 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 St6gal1Q64685 403 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 D11Wsu47eQ6PIX9 558 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr1349Q7TQV1 317 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Slitrk2Q810C0 846 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zfand1Q8BFR6 268 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Flrt2Q8BLU0 660 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Q8BPC6 396 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Cldn17Q8BXA6 224 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fam149aQ8CFV2 787 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 GmdsQ8K0C9 372 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zc3h10Q8R205 435 aaKnown RBP9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zmynd11Q8R5C8 602 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr1261Q8VFB0 306 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Exosc4Q921I9 245 aaKnown RBP9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 NansQ99J77 359 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Park7Q99LX0 189 aaKnown RBP9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Ier3ip1Q9CR20 82 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Obp1aQ9D3H2 163 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Slc6a19Q9D687 634 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Eif3fQ9DCH4 361 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Uchl1Q9R0P9 223 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Sema4fQ9Z123 777 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Spaca5A2AE20 160 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm10112D3YWP5 117 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm45062E0CZ38 131 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm21833J3QPK1 500 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Prl4a1O35256 227 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mid1O70583 680 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 CtslP06797 334 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fcer1aP20489 250 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gja4P28235 333 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tbxa2rP30987 341 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 PtgirP43252 415 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Resp18P47939 175 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Pou3f4P62515 361 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Cd80Q00609 306 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr332Q5NC45 344 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fbxo34Q80XI1 695 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Nudt15Q8BG93 170 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 AgmoQ8BS35 447 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Saysd1Q8K190 188 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 LgalslQ8VED9 172 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mrpl37Q921S7 423 aaKnown RBP9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Sfxn1Q99JR1 322 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tada1Q99LM9 335 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fam69bQ99ML4 431 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Raf1Q99N57 648 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Otud1Q9CUB6 454 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Pmepa1Q9D7R2 260 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Jam3Q9D8B7 310 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Copz2Q9JHH9 205 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Isyna1Q9JHU9 557 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Grb14Q9JLM9 538 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 CorinQ9Z319 1113 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Lao1B1ARV3 523 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Alx4O35137 399 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 CcnkO88874 554 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 P03976 113 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 IapP24822 559 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Clec10aP49300 304 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 S100a11P50543 98 aaKnown RBP9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Ucp3P56501 308 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 DtymkP97930 212 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 2410002F23RikQ3TE80 284 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Dnaaf3Q3UYV8 586 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 BpiQ67E05 483 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Alkbh2Q6P6J4 239 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Eci3Q78JN3 317 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr1463Q7TQR3 310 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Kcmf1Q80UY2 381 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Peli1Q8C669 418 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zbtb26Q8C8S0 451 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Nsun3Q8CCT7 348 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mmp28Q8CGV8 520 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Ndc1Q8VCB1 673 aaKnown RBP9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr516Q8VFZ5 314 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr651Q8VG78 313 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Itfg2Q91WI7 443 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mrm1Q99J25 320 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gimap3Q99MI6 301 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tktl1Q99MX0 595 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Acss1Q99NB1 682 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Dmac2Q9D7K5 258 aaKnown RBP9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tcea2Q9QVN7 299 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Igkv12-38A0A0G2JEI7 115 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zfp345A2AQA1 561 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr1314A2AVL6 312 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zfp735B1ARH2 734 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Ms4a18J3QN01 344 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm21812J3QN84 227 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Dsg2O55111 1122 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 ApelaP0DMC4 54 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zfp13P10754 512 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tmprss11bQ14C59 416 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mfsd12Q3U481 476 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Obox3Q3UT54 335 aa9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Eif1aQ60872 144 aaKnown RBP9.03□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Sidt1Q6AXF6 827 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms