RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 PSD4Q8NDX1 1056 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 TSSK2Q96PF2 358 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 CDC6Q99741 560 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 ARHGAP9Q9BRR9 750 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 DDA1Q9BW61 102 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 SPRY4Q9C004 299 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 FKRPQ9H9S5 495 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 ZNF229Q9UJW7 825 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 CHCHD2Q9Y6H1 151 aaPredicted RBP19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 ARPC3O15145 178 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 PLGP00747 810 aaPredicted RBP19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 CD14P08571 375 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 TSPAN19P0C672 248 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 F8A1P23610 371 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 CRYBB2P43320 205 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 SERPINB10P48595 397 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 RPS25P62851 125 aaKnown RBP19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 NDUFAF7Q7L592 441 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 ADCK1Q86TW2 530 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 ACBD7Q8N6N7 88 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 OR5M1Q8NGP8 315 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 TSPAN32Q96QS1 320 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 TIMP4Q99727 224 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 ALG8Q9BVK2 526 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 SLIRPQ9GZT3 109 aaKnown RBP19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 KLHL21Q9UJP4 597 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 SBK2P0C263 348 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 NAA10P41227 235 aaPredicted RBP19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 KLBQ86Z14 1044 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 KLHL36Q8N4N3 616 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 M1APQ8TC57 530 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 ARL5BQ96KC2 179 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 DDOQ99489 341 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 ZPBPQ9BS86 351 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 RPRD1BQ9NQG5 326 aaKnown RBP19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 FAM86C1Q9NVL1 165 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 TAS2R5Q9NYW4 299 aa19.6■□□□□ 0.73
CHRNA7-228ENST00000637519 A8MVM7 634 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 G3V3Y1 287 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 HIST1H2ABP04908 130 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 CPEP16870 476 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 OPRL1P41146 370 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 Q0VFX4 171 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 DYNC1I2Q13409 638 aaKnown RBP19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 FAM69AQ5T7M9 428 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 SLC6A19Q695T7 634 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 ZNF322Q6U7Q0 402 aaPredicted RBP19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 USP43Q70EL4 1123 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 HIST3H2AQ7L7L0 130 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 SSX6Q7RTT6 188 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 TMEM234Q8WY98 164 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 SMPDL3BQ92485 455 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 HIST1H2ACQ93077 130 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 TM9SF2Q99805 663 aa19.59■□□□□ 0.73
CHRNA7-228ENST00000637519 EP300Q09472 2414 aaPredicted RBP19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 CCDC187A0A096LP49 1063 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 DAPL1A0PJW8 107 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 TFP02787 698 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 INHBBP09529 407 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 SPI1P17947 270 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 GRPRP30550 384 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 PYCR1P32322 319 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 TRIP6Q15654 476 aaKnown RBP19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 DGUOKQ16854 277 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 MESTQ5EB52 335 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 ZNF468Q5VIY5 522 aaPredicted RBP19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 OR6K6Q8NGW6 343 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 ANKRD10Q9NXR5 420 aa19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 FARSAQ9Y285 508 aaKnown RBP19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 MRPS18BQ9Y676 258 aaKnown RBP19.58■□□□□ 0.73
CHRNA7-228ENST00000637519 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 HTR3EA5X5Y0 456 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 H3BML4 177 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 MAGEB4O15481 346 aaPredicted RBP19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 OPN1LWP04000 364 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 AHCYP23526 432 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 SDHAP31040 664 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 BMXP51813 675 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 ASB15Q8WXK1 588 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 JAM3Q9BX67 310 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 STUB1Q9UNE7 303 aa19.58■□□□□ 0.72
CHRNA7-228ENST00000637519 A0A1W2PQL4 384 aaPredicted RBP19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 CCL3P10147 92 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 PSMA1P25786 263 aaKnown RBP19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 SUMO3P55854 103 aaPredicted RBP19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 ZNF85Q03923 595 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 C19orf57Q0VDD7 668 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 IL10RAQ13651 578 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 TIMM50Q3ZCQ8 353 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 B3GNTL1Q67FW5 361 aaPredicted RBP19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 MAMDC2Q7Z304 686 aaPredicted RBP19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 JAZF1Q86VZ6 243 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 KDM8Q8N371 416 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 WDSUB1Q8N9V3 476 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 ZNF417Q8TAU3 575 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 ST8SIA1Q92185 356 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 UFD1Q92890 307 aa19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 DCLRE1CQ96SD1 692 aaKnown RBP19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 ZNF587Q96SQ5 575 aaPredicted RBP19.57■□□□□ 0.72
CHRNA7-228ENST00000637519 TMEM185BQ9H7F4 350 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms