RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PROK1P58294 105 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 DAG1Q14118 895 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 EFNB3Q15768 340 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 ADIPOQQ15848 244 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 SNCBQ16143 134 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 ZNF239Q16600 458 aaKnown RBP5.93□□□□□ -1.46
CHD3-213ENST00000571249 C18orf21Q32NC0 220 aaPredicted RBP5.93□□□□□ -1.46
CHD3-213ENST00000571249 TMEM35AQ53FP2 167 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 PDSS1Q5T2R2 415 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 C1QTNF12Q5T7M4 302 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 KANK2Q63ZY3 851 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 RNF165Q6ZSG1 346 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 ADAMTSL2Q86TH1 951 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 ARHGAP24Q8N264 748 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 CCNYL1Q8N7R7 359 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 PTGR2Q8N8N7 351 aaPredicted RBP5.93□□□□□ -1.46
CHD3-213ENST00000571249 PDPRQ8NCN5 879 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 RBM15BQ8NDT2 890 aaKnown RBP5.93□□□□□ -1.46
CHD3-213ENST00000571249 ZNF483Q8TF39 744 aaPredicted RBP5.93□□□□□ -1.46
CHD3-213ENST00000571249 DUSP19Q8WTR2 217 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 ZNF775Q96BV0 537 aaPredicted RBP5.93□□□□□ -1.46
CHD3-213ENST00000571249 NUDT16L1Q9BRJ7 211 aaKnown RBP5.93□□□□□ -1.46
CHD3-213ENST00000571249 MS4A8Q9BY19 250 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 SRXN1Q9BYN0 137 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 RTN4RQ9BZR6 473 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 PITHD1Q9GZP4 211 aaPredicted RBP5.93□□□□□ -1.46
CHD3-213ENST00000571249 SDHAF3Q9NRP4 125 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 CA10Q9NS85 328 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 NUDT4Q9NZJ9 180 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 FBXL7Q9UJT9 491 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 NUP50Q9UKX7 468 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 VDAC3Q9Y277 283 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 MDFIC2A0A1B0GVS7 189 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 SHISA3A0PJX4 238 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 C7orf72A4D263 438 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 hCG_2039718K7EN88 272 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 UBXN8O00124 270 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 CLGNO14967 610 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 PRAMEF4O60810 478 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 SUPT7LO94864 414 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 ESRRBO95718 433 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 IGHV3-9P01782 118 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 JUNP05412 331 aaKnown RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 CRYBA1P05813 215 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 ENO1P06733 434 aaKnown RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 IGFBP1P08833 259 aaPredicted RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 NR2F6P10588 404 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 COX4I1P13073 169 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 COL8A2P25067 703 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 PIK3R1P27986 724 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 EVI2BP34910 448 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 SLC1A3P43003 542 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 XKP51811 444 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 MAP2K6P52564 334 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 PKNOX1P55347 436 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 LGALS4P56470 323 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 PCBP3P57721 371 aaKnown RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 RAB1AP62820 205 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 RAC1P63000 192 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 DBPQ10586 325 aaPredicted RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 LCP2Q13094 533 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 PMS2P11Q13670 270 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 TGFBIQ15582 683 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 TSNQ15631 228 aaKnown RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 ADRM1Q16186 407 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 PFKFB4Q16877 469 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 KLF17Q5JT82 389 aaPredicted RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 PRAMEF9Q5VWM5 478 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 OGFOD2Q6N063 350 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 FIP1L1Q6UN15 594 aaKnown RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 FCRLAQ7L513 359 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 ZNF100Q8IYN0 542 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 WDR31Q8NA23 367 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 ATG16L2Q8NAA4 619 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 PCYOX1LQ8NBM8 494 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 OR52R1Q8NGF1 315 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 LINC01006Q8NI28 216 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 RP9Q8TA86 221 aaKnown RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 UBTD2Q8WUN7 234 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 NRG4Q8WWG1 115 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 ZNF566Q969W8 418 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 RGMAQ96B86 450 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 EFHD2Q96C19 240 aaPredicted RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 PHF21BQ96EK2 531 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 MARS2Q96GW9 593 aaKnown RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 ZNF382Q96SR6 550 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 DOK1Q99704 481 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 NPAS1Q99742 590 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 CCT7Q99832 543 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 NUF2Q9BZD4 464 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 OR51B5Q9H339 312 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 TPK1Q9H3S4 243 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 DENND2DQ9H6A0 471 aaPredicted RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 WDR55Q9H6Y2 383 aaPredicted RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 ZNF665Q9H7R5 613 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 CXorf36Q9H7Y0 433 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 WDR41Q9HAD4 459 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 TNFRSF12AQ9NP84 129 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 DYNLRB1Q9NP97 96 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 TMEM45AQ9NWC5 275 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms