RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 SLC6A8P48029 635 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 ALDH3B2P48448 385 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 CSNK2BP67870 215 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 ZNF117Q03924 483 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 GINS1Q14691 196 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 WBP2NLQ6ICG8 309 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 ZNF620Q6ZNG0 422 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 PTCHD4Q6ZW05 846 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 MARCH3Q86UD3 253 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 CDK20Q8IZL9 346 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 IQCF1Q8N6M8 205 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 SLC22A8Q8TCC7 542 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 RND1Q92730 232 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 SH3YL1Q96HL8 342 aaPredicted RBP12.18□□□□□ -0.46
TMED3-205ENST00000558562 EGLN3Q9H6Z9 239 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 VCX3AQ9NNX9 186 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 DLL4Q9NR61 685 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 RPH3AQ9Y2J0 694 aaPredicted RBP12.18□□□□□ -0.46
TMED3-205ENST00000558562 SNX5Q9Y5X3 404 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 CDH10Q9Y6N8 788 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 SMIM31A0A1B0GVY4 71 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 TFECO14948 347 aaPredicted RBP12.17□□□□□ -0.46
TMED3-205ENST00000558562 HCRTR2O43614 444 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 FADS1O60427 444 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 NAGAP17050 411 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 MAKP20794 623 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 TMED10P49755 219 aaKnown RBP12.17□□□□□ -0.46
TMED3-205ENST00000558562 CTBP2P56545 445 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 FBXW4P57775 412 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 PMPCAQ10713 525 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 SMN1Q16637 294 aaKnown RBP12.17□□□□□ -0.46
TMED3-205ENST00000558562 TMEM211Q6ICI0 200 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 CBLN3Q6UW01 205 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 KCTD8Q6ZWB6 473 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 ZNF227Q86WZ6 799 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 MISPQ8IVT2 679 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 CCDC103Q8IW40 242 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 CLDN22Q8N7P3 220 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 OR8D4Q8NGM9 314 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 FANK1Q8TC84 345 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 ELP5Q8TE02 316 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 IPCEF1Q8WWN9 437 aaPredicted RBP12.17□□□□□ -0.46
TMED3-205ENST00000558562 SGCDQ92629 289 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 OSTF1Q92882 214 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 HGDQ93099 445 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 C3orf49Q96BT1 292 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 TMCO6Q96DC7 493 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 SMR3AQ99954 134 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 ZNF426Q9BUY5 554 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 PRRG3Q9BZD7 231 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 PLA2G12AQ9BZM1 189 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 CCNB1IP1Q9NPC3 277 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 PAK1IP1Q9NWT1 392 aaPredicted RBP12.17□□□□□ -0.46
TMED3-205ENST00000558562 CLN6Q9NWW5 311 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 NDUFA13Q9P0J0 144 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 MPDZO75970 2070 aa12.17□□□□□ -0.46
TMED3-205ENST00000558562 HRNRQ86YZ3 2850 aaPredicted RBP12.16□□□□□ -0.46
TMED3-205ENST00000558562 ELOA3DA6NLF2 546 aaPredicted RBP12.16□□□□□ -0.46
TMED3-205ENST00000558562 EFCAB9A8MZ26 197 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 PTGES3LE9PB15 166 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 GNB5O14775 395 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 ZNF354AO60765 605 aaPredicted RBP12.16□□□□□ -0.46
TMED3-205ENST00000558562 GIPRP48546 466 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 MEOX1P50221 254 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 SNRPGP62308 76 aaKnown RBP12.16□□□□□ -0.46
TMED3-205ENST00000558562 CDK5Q00535 292 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 LTBQ06643 244 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 SNTB1Q13884 538 aaKnown RBP12.16□□□□□ -0.46
TMED3-205ENST00000558562 ELOA3BQ3SY89 546 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 SLC27A4Q6P1M0 643 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 LINC00114Q6XXX2 140 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 TMPRSS11FQ6ZWK6 438 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 NUP54Q7Z3B4 507 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 RPS19BP1Q86WX3 136 aaKnown RBP12.16□□□□□ -0.46
TMED3-205ENST00000558562 LSRQ86X29 649 aaPredicted RBP12.16□□□□□ -0.46
TMED3-205ENST00000558562 ZNF540Q8NDQ6 660 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 ELOA3Q8NG57 546 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 OR52L1Q8NGH7 329 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 OR5M3Q8NGP4 307 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 ZNF563Q8TA94 476 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 NINJ1Q92982 152 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 BPIFA2Q96DR5 249 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 NODALQ96S42 347 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 TSSK6Q9BXA6 273 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 RTN4RQ9BZR6 473 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 CCDC90BQ9GZT6 254 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 MEPEQ9NQ76 525 aaPredicted RBP12.16□□□□□ -0.46
TMED3-205ENST00000558562 C20orf141Q9NUB4 165 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 PLCXD1Q9NUJ7 323 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 TVP23BQ9NYZ1 205 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 MYOTQ9UBF9 498 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 ST6GALNAC2Q9UJ37 374 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 ICAM5Q9UMF0 924 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 PLEKHA6Q9Y2H5 1048 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 JMJD1CQ15652 2540 aa12.16□□□□□ -0.46
TMED3-205ENST00000558562 NSD1Q96L73 2696 aaPredicted RBP12.15□□□□□ -0.46
TMED3-205ENST00000558562 DNAJC13O75165 2243 aa12.15□□□□□ -0.46
TMED3-205ENST00000558562 A0A087WUJ7 227 aa12.15□□□□□ -0.46
TMED3-205ENST00000558562 SH3D21A4FU49 640 aa12.15□□□□□ -0.46
TMED3-205ENST00000558562 CDC42EP2O14613 210 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms