RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 UBQLN4Q9NRR5 601 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 UBQLN2Q9UHD9 624 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 PLEKHA6Q9Y2H5 1048 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 CT62P0C5K7 136 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 MRM1Q6IN84 353 aaKnown RBP14.23□□□□□ -0.13
AP4E1-202ENST00000558439 FAAP20Q6NZ36 180 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 KCTD18Q6PI47 426 aaPredicted RBP14.23□□□□□ -0.13
AP4E1-202ENST00000558439 POGLUT1Q8NBL1 392 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 TMEM106AQ96A25 262 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 CDCP1Q9H5V8 836 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 TRPV4Q9HBA0 871 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 NRIP3Q9NQ35 241 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 SLC2A4RGQ9NR83 387 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 CA14Q9ULX7 337 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 LSM2Q9Y333 95 aaKnown RBP14.23□□□□□ -0.13
AP4E1-202ENST00000558439 PLA2G10O15496 165 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 LIPCP11150 499 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 NKAIN2Q5VXU1 208 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 KDM8Q8N371 416 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 BAHD1Q8TBE0 780 aaPredicted RBP14.23□□□□□ -0.13
AP4E1-202ENST00000558439 BRIX1Q8TDN6 353 aaKnown RBP14.23□□□□□ -0.13
AP4E1-202ENST00000558439 SENP5Q96HI0 755 aaPredicted RBP14.23□□□□□ -0.13
AP4E1-202ENST00000558439 TMEM185BQ9H7F4 350 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 NOX3Q9HBY0 568 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 LYRM4Q9HD34 91 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 ING1Q9UK53 422 aaPredicted RBP14.23□□□□□ -0.13
AP4E1-202ENST00000558439 VDAC3Q9Y277 283 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 SIGLEC7Q9Y286 467 aa14.23□□□□□ -0.13
AP4E1-202ENST00000558439 H3BML4 177 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 DVL2O14641 736 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 PTHLHP12272 177 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 COL9A1P20849 921 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 SNTA1Q13424 505 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 EFR3AQ14156 821 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 ZMYND11Q15326 602 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 ZAR1Q86SH2 424 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 OR2L13Q8N349 312 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 ADAMTS14Q8WXS8 1223 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 KLHL15Q96M94 604 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 STACQ99469 402 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 GTPBP2Q9BX10 602 aaKnown RBP14.22□□□□□ -0.13
AP4E1-202ENST00000558439 NXF2Q9GZY0 626 aaKnown RBP14.22□□□□□ -0.13
AP4E1-202ENST00000558439 TSPAN10Q9H1Z9 355 aaPredicted RBP14.22□□□□□ -0.13
AP4E1-202ENST00000558439 LIN7BQ9HAP6 207 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 A0A0A6YYJ9 748 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 C5orf51A6NDU8 294 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 EFEMP2O95967 443 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 SRMP19623 302 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 PEBP1P30086 187 aaKnown RBP14.22□□□□□ -0.13
AP4E1-202ENST00000558439 RAB30Q15771 203 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 NKPD1Q17RQ9 610 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 ZNF425Q6IV72 752 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 KCTD9Q7L273 389 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 ZNF440Q8IYI8 595 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 CA13Q8N1Q1 262 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 GPR148Q8TDV2 347 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 DAZLQ92904 295 aaKnown RBP14.22□□□□□ -0.13
AP4E1-202ENST00000558439 NXPE2Q96DL1 559 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 UPB1Q9UBR1 384 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 FLVCR2Q9UPI3 526 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 EVI2BP34910 448 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 GZMKP49863 264 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 TFF2Q03403 129 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 OR4C3Q8NH37 302 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 DCLRE1CQ96SD1 692 aaKnown RBP14.22□□□□□ -0.13
AP4E1-202ENST00000558439 INTS14Q96SY0 518 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 ZNF350Q9GZX5 532 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 CRISPLD2Q9H0B8 497 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 PLCL2Q9UPR0 1127 aa14.22□□□□□ -0.13
AP4E1-202ENST00000558439 RP1P56715 2156 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 MN1Q10571 1320 aaPredicted RBP14.21□□□□□ -0.13
AP4E1-202ENST00000558439 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.21□□□□□ -0.13
AP4E1-202ENST00000558439 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.21□□□□□ -0.13
AP4E1-202ENST00000558439 TEX46H3BTG2 121 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 TBX6O95947 436 aaPredicted RBP14.21□□□□□ -0.13
AP4E1-202ENST00000558439 PNMTP11086 282 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 PGCP20142 388 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 HTR2AP28223 471 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 ARRB1P49407 418 aaPredicted RBP14.21□□□□□ -0.13
AP4E1-202ENST00000558439 PRAMEF17Q5VTA0 474 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 GLT8D1Q68CQ7 371 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 WBP2NLQ6ICG8 309 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 AUNIPQ9H7T9 357 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 ELOVL3Q9HB03 270 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 ACAD8Q9UKU7 415 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 DSPPQ9NZW4 1301 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 C13orf42A0A1B0GVH6 325 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 ZNF264O43296 627 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 FRKP42685 505 aaPredicted RBP14.21□□□□□ -0.13
AP4E1-202ENST00000558439 KIAA1024LP59773 190 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 YPEL5P62699 121 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 KCNAB1Q14722 419 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 ZNF628Q5EBL2 1059 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 C1orf53Q5VUE5 145 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 LIPNQ5VXI9 398 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 CARD17Q5XLA6 110 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 MAMDC2Q7Z304 686 aaPredicted RBP14.21□□□□□ -0.13
AP4E1-202ENST00000558439 C15orf40Q8WUR7 153 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 SEC22CQ9BRL7 303 aa14.21□□□□□ -0.13
AP4E1-202ENST00000558439 ZMAT3Q9HA38 289 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms