RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 PNO1Q9NRX1 252 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 QPCTLQ9NXS2 382 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 APOBEC3BQ9UH17 382 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SCML2Q9UQR0 700 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 VSIG4Q9Y279 399 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ADGRB2O60241 1585 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 TTC3P53804 2025 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 PREX1Q8TCU6 1659 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 QSER1Q2KHR3 1735 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ARAP2Q8WZ64 1704 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 LAMC3Q9Y6N6 1575 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 TEX48A0A1B0GUV7 120 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 A0A1B0GWB2 263 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 A0A1W2PR80 420 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 GOLGA8OA6NCC3 632 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 CCT8L1PA6NM43 557 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 GOLGA8JA6NMD2 632 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 A8MX80 341 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 GOLGA8NF8WBI6 632 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 HCRTR1O43613 425 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 PRKAB2O43741 272 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 SPOPO43791 374 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 CXCL13O43927 109 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 GPRIN2O60269 458 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 CDC40O60508 579 aaKnown RBP eCLIP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 PFKFB2O60825 505 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 AMBPP02760 352 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 CCDC172P0C7W6 258 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 GOLGA8HP0CJ92 632 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 GATA1P15976 413 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ABOP16442 354 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 PRKACAP17612 351 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 WARSP23381 471 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 GCKP35557 465 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 DEKP35659 375 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 LONP1P36776 959 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 RGRP47804 291 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 NOVA1P51513 510 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 RIPK4P57078 832 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 RPS15P62841 145 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 MRPS22P82650 360 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 TRDNQ13061 729 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ABRAXAS2Q15018 415 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 WDR25Q64LD2 544 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ATL3Q6DD88 541 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ACSM5Q6NUN0 579 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZCCHC12Q6PEW1 402 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZNF589Q86UQ0 364 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 SLC25A42Q86VD7 318 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZNF440Q8IYI8 595 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 SLC22A18ASQ8N1D0 253 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 CSNK1A1LQ8N752 337 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 FAM81AQ8TBF8 368 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 MAGEE2Q8TD90 523 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 MCOLN3Q8TDD5 553 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 MITD1Q8WV92 249 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 C8orf44Q96CB5 159 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 SEH1LQ96EE3 360 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 C9orf72Q96LT7 481 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZNF641Q96N77 438 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 LITAFQ99732 161 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 EBF4Q9BQW3 602 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 SPATA16Q9BXB7 569 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 SUDS3Q9H7L9 328 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 SH2D2AQ9NP31 389 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 DMAP1Q9NPF5 467 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 PEF1Q9UBV8 284 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 KIAA1257Q9ULG3 409 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 TIMM10BQ9Y5J6 103 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZNFX1Q9P2E3 1918 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 CNTNAP2Q9UHC6 1331 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 NUP98P52948 1817 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 SLX4Q8IY92 1834 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 KIF13BQ9NQT8 1826 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 LMTK2Q8IWU2 1503 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 PIK3R4Q99570 1358 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ANKRD30BQ9BXX2 1392 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 CHD4Q14839 1912 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 PPLO60437 1756 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 IGKV3D-15A0A087WSY6 115 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 TRAV39A0A0B4J263 110 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 NDUFS8O00217 210 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 DUSP14O95147 198 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 UBTFL1P0CB47 393 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZSCAN5DPP0CG00 497 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 UMPSP11172 480 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 LAP3P28838 519 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 PBLDP30039 288 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 HPCAL1P37235 193 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 NAA10P41227 235 aaPredicted RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 MRPL19P49406 292 aaKnown RBP1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 CASP4P49662 377 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 PKNOX1P55347 436 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 FBXW4P57775 412 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZNF45Q02386 682 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 OR5I1Q13606 314 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 PARP15Q460N3 678 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 C1orf220Q5T0J3 134 aa1.09□□□□□ -2.24
CTDSPL2-202ENST00000558373 C9orf135Q5VTT2 229 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms