RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 TCEA1P23193 301 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 NAA10P41227 235 aaPredicted RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 RPL18Q07020 188 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 TPBGQ13641 420 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 INSL4Q14641 139 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 NDUFA5Q16718 116 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 CRTC2Q53ET0 693 aaPredicted RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 LYPD4Q6UWN0 246 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 RFLNBQ8N5W9 214 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 OR10G3Q8NGC4 313 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 HGDQ93099 445 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 TIMP4Q99727 224 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 NDEL1Q9GZM8 345 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 WDR54Q9H977 334 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 KLRF1Q9NZS2 232 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 KLHL21Q9UJP4 597 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 ZNF346Q9UL40 294 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 VDAC3Q9Y277 283 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 HIF3AQ9Y2N7 669 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 TMED7Q9Y3B3 224 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 C9J4A7 227 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 C11orf98E9PRG8 122 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 MAGEB4O15481 346 aaPredicted RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 KLF7O75840 302 aaPredicted RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 HIST1H2ABP04908 130 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 CDKN2AP42771 156 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 PCOLCEQ15113 449 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 LEG1Q6P5S2 330 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 HIST3H2AQ7L7L0 130 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 ADGRG3Q86Y34 549 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 SLC43A2Q8N370 569 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 HIST1H2ACQ93077 130 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 TSSK2Q96PF2 358 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 DCLRE1CQ96SD1 692 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 HMG20AQ9NP66 347 aa16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 SF3B6Q9Y3B4 125 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-220ENST00000556548 SHISA8B8ZZ34 492 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 FAM47E-STBD1D6RA91 191 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 H7C1C5 153 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 ZNF883P0CG24 379 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 POLR2HP52434 150 aaKnown RBP16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 LCN6P62502 163 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 FABP5Q01469 135 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 ZNF846Q147U1 533 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 ARSKQ6UWY0 536 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 TMPRSS11AQ6ZMR5 421 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 SSX6Q7RTT6 188 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 SYT14Q8NB59 555 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 ATP6V1C2Q8NEY4 427 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 OR6K6Q8NGW6 343 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 OR52N1Q8NH53 320 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 HDHD5Q9BXW7 423 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 LOXL2Q9Y4K0 774 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 NOX1Q9Y5S8 564 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 A0A1W2PQL4 384 aaPredicted RBP16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 CDRT1O95170 752 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 INPP5JQ15735 1006 aaPredicted RBP16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 PLA2G2CQ5R387 149 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 MFSD4AQ8N468 514 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 LRRC75AQ8NAA5 344 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 LSM14AQ8ND56 463 aaKnown RBP16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 MMP27Q9H306 513 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 C12orf10Q9HB07 376 aa16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 RPRD1BQ9NQG5 326 aaKnown RBP16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 CCDC59Q9P031 241 aaKnown RBP16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 NXT1Q9UKK6 140 aaKnown RBP16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 CAB39Q9Y376 341 aaPredicted RBP16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 SIRT4Q9Y6E7 314 aaPredicted RBP16.61■□□□□ 0.25
SDR39U1-220ENST00000556548 TRAV36DV7A0A075B6V5 113 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 ZNF670-ZNF695F2Z2N8 137 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 J3QLW9 94 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 CDX4O14627 284 aaPredicted RBP16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 AKAP8O43823 692 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 CD14P08571 375 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 CLEC2LP0C7M8 214 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 ZNF19P17023 458 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 UQCRC1P31930 480 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 SOX6P35712 828 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 RPS18P62269 152 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 ZNF85Q03923 595 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 GALEQ14376 348 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 LIPHQ8WWY8 451 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 ISYNA1Q9NPH2 558 aa16.6■□□□□ 0.25
SDR39U1-220ENST00000556548 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 E9PI62 339 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 SLC30A4O14863 429 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 ARPC3O15145 178 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 PLGP00747 810 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 TFP02787 698 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 BGLAPP02818 100 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 CD59P13987 128 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 SPI1P17947 270 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 AHCYP23526 432 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 PYCR1P32322 319 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 C17orf67Q0P5P2 114 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 ARMC4Q5T2S8 1044 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 GDPGP1Q6ZNW5 385 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 FAM122BQ7Z309 247 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 GRINAQ7Z429 371 aa16.59■□□□□ 0.25
SDR39U1-220ENST00000556548 JAZF1Q86VZ6 243 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms