RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 HIKESHIQ53FT3 197 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 PDLIM3Q53GG5 364 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-219ENST00000553488 CLEC6AQ6EIG7 209 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 RNF165Q6ZSG1 346 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 OLIG3Q7RTU3 272 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SPATA19Q7Z5L4 167 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 MYPOPQ86VE0 399 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF786Q8N393 782 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 C3orf56Q8N813 242 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SYT8Q8NBV8 401 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 OR56A1Q8NGH5 318 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 OR5D16Q8NGK9 328 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SFXN5Q8TD22 340 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 FAM216AQ8WUB2 273 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 TMEM45BQ96B21 275 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 ARL8AQ96BM9 186 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 MTERF3Q96E29 417 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 ZHX1-C8orf76Q96EF9 292 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 DNAJA3Q96EY1 480 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 CHMP6Q96FZ7 201 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SLC38A2Q96QD8 506 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SDF2Q99470 211 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SYT3Q9BQG1 590 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 KATNB1Q9BVA0 655 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 KRTAP4-9Q9BYQ8 210 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 OR11A1Q9GZK7 315 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 NELFAQ9H3P2 528 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 TUBB1Q9H4B7 451 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 METTL17Q9H7H0 456 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-219ENST00000553488 CTPS2Q9NRF8 586 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 CRNNQ9UBG3 495 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-219ENST00000553488 CHRNA9Q9UGM1 479 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 BAIAP2L1Q9UHR4 511 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 ATP6V1HQ9UI12 483 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SLC9A8Q9Y2E8 581 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 HDGFL3Q9Y3E1 203 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SPEF1Q9Y4P9 236 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 RYR3Q15413 4870 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 TCRBV5S2A0A599 114 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 H3BQF6 201 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 KLF11O14901 512 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 LSM1O15116 133 aaKnown RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 PRODHO43272 600 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 FCMRO60667 390 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 UGT2B17O75795 530 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 SNUPNO95149 360 aaKnown RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 IGLV1-44P01699 117 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 OR4A8P0C604 315 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 CECR9P0C854 216 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 UBTFL6P0CB48 400 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 UROSP10746 265 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 LAMP1P11279 417 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 NEFHP12036 1026 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 PCMT1P22061 227 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 PGM1P36871 562 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 APOBEC1P41238 236 aaKnown RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 MAGEA8P43361 318 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 CCT3P49368 545 aaKnown RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 KHKP50053 298 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 NAAAQ02083 359 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 TGFBR3Q03167 851 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 CCNIQ14094 377 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 SLC17A1Q14916 467 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 MAPK14Q16539 360 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 C3orf36Q3SXR2 165 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 TBRG1Q3YBR2 411 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 ATP6AP1LQ52LC2 224 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 RFTN2Q52LD8 501 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 LIPMQ5VYY2 423 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 EMBQ6PCB8 327 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 ZYG11AQ6WRX3 759 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 USP43Q70EL4 1123 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 GLCCI1Q86VQ1 547 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 ZCCHC24Q8N2G6 241 aaKnown RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 LILRB2Q8N423 598 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 CCNYL1Q8N7R7 359 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 ZIC4Q8N9L1 334 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 NUP37Q8NFH4 326 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 OR7A2PQ8NGA2 310 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 ADAMTS15Q8TE58 950 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 NEU4Q8WWR8 484 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 TMEM234Q8WY98 164 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 OR7D2Q96RA2 312 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 SPATA9Q9BWV2 254 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF350Q9GZX5 532 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 RAB1BQ9H0U4 201 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF442Q9H7R0 627 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 OBP2BQ9NPH6 170 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 SERINC1Q9NRX5 453 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 UPB1Q9UBR1 384 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 COA3Q9Y2R0 106 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 TMED5Q9Y3A6 229 aa6.28□□□□□ -1.4
ATXN3-219ENST00000553488 SPIN1Q9Y657 262 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-219ENST00000553488 DNAH3Q8TD57 4116 aa6.27□□□□□ -1.4
ATXN3-219ENST00000553488 A0A087WUV0 522 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 ARPC4-TTLL3A0A0A6YYG9 625 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 TRAV20A0A0B4J274 112 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 EXOC1LA0A1B0GW35 172 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 TMEM129A0AVI4 362 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 B4DSR2 109 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms