RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 SFXN2Q96NB2 322 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 TPSD1Q9BZJ3 242 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 C20orf85Q9H1P6 137 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 NOX3Q9HBY0 568 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 CALML5Q9NZT1 146 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 KIF26BQ2KJY2 2108 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 WDFY3Q8IZQ1 3526 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 CNOT1A5YKK6 2376 aaKnown RBP8.98□□□□□ -0.97
CMC1-209ENST00000477739 IRGMA1A4Y4 181 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 UBE2QL1A1L167 161 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 PRSS38A1L453 326 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 FITM1A5D6W6 292 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 SLC22A31A6NKX4 558 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 ZNF593O00488 134 aaPredicted RBP8.98□□□□□ -0.97
CMC1-209ENST00000477739 AGPAT2O15120 278 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 SLC19A2O60779 497 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 CTNSO60931 367 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 STARP49675 285 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 FXYD6P3P58550 94 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 RPS15P62841 145 aaKnown RBP8.98□□□□□ -0.97
CMC1-209ENST00000477739 PLA2G7Q13093 441 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 MEP1BQ16820 701 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 LAMTOR1Q6IAA8 161 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 OR7E24Q6IFN5 339 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 SLC35F2Q8IXU6 374 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 FAM160A2Q8N612 972 aaPredicted RBP8.98□□□□□ -0.97
CMC1-209ENST00000477739 NPRL2Q8WTW4 380 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 NXPE2Q96DL1 559 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 CXorf58Q96LI9 332 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 ADOQ96SZ5 270 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 PITHD1Q9GZP4 211 aaPredicted RBP8.98□□□□□ -0.97
CMC1-209ENST00000477739 SLITRK2Q9H156 845 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 ATG5Q9H1Y0 275 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 SAV1Q9H4B6 383 aaPredicted RBP8.98□□□□□ -0.97
CMC1-209ENST00000477739 FOLH1BQ9HBA9 442 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 MKKSQ9NPJ1 570 aaPredicted RBP8.98□□□□□ -0.97
CMC1-209ENST00000477739 OR2S2Q9NQN1 319 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 CGGBP1Q9UFW8 167 aaPredicted RBP8.98□□□□□ -0.97
CMC1-209ENST00000477739 SF3B6Q9Y3B4 125 aaKnown RBP8.98□□□□□ -0.97
CMC1-209ENST00000477739 HEBP2Q9Y5Z4 205 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 POLEQ07864 2286 aa8.98□□□□□ -0.97
CMC1-209ENST00000477739 HCRTR2O43614 444 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 ZNF35P13682 527 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 ARHGAP40Q5TG30 622 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 OLFML2AQ68BL7 652 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 SIGIRRQ6IA17 410 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 DGAT2L6Q6ZPD8 337 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 LINC00299Q6ZSB3 139 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 PLCZ1Q86YW0 608 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 OR51A4Q8NGJ6 313 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 MYADMQ96S97 322 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.97□□□□□ -0.97
CMC1-209ENST00000477739 SYT4Q9H2B2 425 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 CA10Q9NS85 328 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 KLHL9Q9P2J3 617 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 LAMP5Q9UJQ1 280 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 POLR1DQ9Y2S0 133 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 CACNA1DQ01668 2161 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 ICE1Q9Y2F5 2266 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 URADA6NGE7 173 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 LEUTXA8MZ59 168 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 GPR89AB7ZAQ6 455 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 SLC33A1O00400 549 aaPredicted RBP8.97□□□□□ -0.97
CMC1-209ENST00000477739 GPR171O14626 319 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 IFNA7P01567 189 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 GPR89BP0CG08 455 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 RPL35P42766 123 aaKnown RBP8.97□□□□□ -0.97
CMC1-209ENST00000477739 OR1D4P47884 311 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 ARL4DP49703 201 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 SPOCK1Q08629 439 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 HTR4Q13639 388 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 UBXN2BQ14CS0 331 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 EOGTQ5NDL2 527 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 C16orf47Q6ZP98 133 aaPredicted RBP8.97□□□□□ -0.97
CMC1-209ENST00000477739 LIX1LQ8IVB5 337 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 GID4Q8IVV7 300 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 OR4C3Q8NH37 302 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 RSC1A1Q92681 617 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 CNN2Q99439 309 aaKnown RBP8.97□□□□□ -0.97
CMC1-209ENST00000477739 CMKLR1Q99788 373 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 PBX4Q9BYU1 374 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 NT5DC2Q9H857 520 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 MEPEQ9NQ76 525 aaPredicted RBP8.97□□□□□ -0.97
CMC1-209ENST00000477739 FBXO4Q9UKT5 387 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 DTX4Q9Y2E6 619 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 MAB21L2Q9Y586 359 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 PCDHGB7Q9Y5F8 929 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 DSPPQ9NZW4 1301 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 DOCK7Q96N67 2140 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 EEF1E1-BLOC1S5C9J1V9 151 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 RGS13O14921 159 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 LINC01565O15544 149 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 SLC43A1O75387 559 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 HIST1H2ABP04908 130 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 ZNF10P21506 573 aaPredicted RBP8.97□□□□□ -0.97
CMC1-209ENST00000477739 FPR3P25089 353 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 GRK6P43250 576 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 ILF3Q12906 894 aaKnown RBP eCLIP8.97□□□□□ -0.976e-6■■□□□ 11.4
CMC1-209ENST00000477739 DUSP6Q16828 381 aa8.97□□□□□ -0.97
CMC1-209ENST00000477739 ESCO2Q56NI9 601 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms