RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 SLC46A3Q7Z3Q1 461 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 LNX2Q8N448 690 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 FAM26EQ8N5C1 309 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 ATP6V1C2Q8NEY4 427 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 OR8D4Q8NGM9 314 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 OR14L1PQ8NHC6 308 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 MFSD8Q8NHS3 518 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 TMEM163Q8TC26 289 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 HAS2Q92819 552 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 TAAR8Q969N4 342 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 GNRHR2Q96P88 292 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 IL4I1Q96RQ9 567 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 FN3KQ9H479 309 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 PLCXD1Q9NUJ7 323 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF226Q9NYT6 803 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 KLHL21Q9UJP4 597 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 HIF3AQ9Y2N7 669 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 MRPS18CQ9Y3D5 142 aaKnown RBP11.06□□□□□ -0.64
MRPL55-227ENST00000475832 NOTCH2Q04721 2471 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 DOPEY2Q9Y3R5 2298 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 PTGES3LE9PB15 166 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 LINC01387J3KSC0 135 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 SURF4O15260 269 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 NPIPB7O75200 414 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 TRAPPC6AO75865 159 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 NEURL1O76050 574 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 F10P00742 488 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 BGLAPP02818 100 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 SP1P08047 785 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 ASAH2BP0C7U1 165 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 ATP6V1B1P15313 513 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 GDF1P27539 372 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 NR1H2P55055 460 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 PLGLB1Q02325 96 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 EGR4Q05215 589 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 PMS2P3Q13401 168 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 SYT14P1Q58G82 188 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 TMEM201Q5SNT2 666 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF773Q6PK81 442 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 CCDC71Q8IV32 467 aaPredicted RBP11.05□□□□□ -0.64
MRPL55-227ENST00000475832 SVOPQ8N4V2 548 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 SCAIQ8N9R8 606 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 FAM98AQ8NCA5 519 aaKnown RBP11.05□□□□□ -0.64
MRPL55-227ENST00000475832 OR2M7Q8NG81 312 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 OR4Q3Q8NH05 313 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 OR5J2Q8NH18 312 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 NTNG2Q96CW9 530 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 ERMAPQ96PL5 475 aaPredicted RBP11.05□□□□□ -0.64
MRPL55-227ENST00000475832 COL12A1Q99715 3063 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 KLHDC3Q9BQ90 382 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 CCDC90BQ9GZT6 254 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 PROK2Q9HC23 129 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 MCCC2Q9HCC0 563 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 PLA2G3Q9NZ20 509 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 IL20RAQ9UHF4 553 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.05□□□□□ -0.64
MRPL55-227ENST00000475832 HDGFL3Q9Y3E1 203 aa11.05□□□□□ -0.64
MRPL55-227ENST00000475832 NINQ8N4C6 2090 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 CLCA1A8K7I4 914 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 PRR23D1E9PI22 279 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 H3BML4 177 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 ACOT7O00154 380 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 BHLHE40O14503 412 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 IMPA2O14732 288 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 RGS10O43665 173 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 NME2P1O60361 137 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 WBP4O75554 376 aaKnown RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 PPP1R3DO95685 299 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 ITGB2P05107 769 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 PRR23D2P0DMB1 279 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 APEHP13798 732 aaKnown RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 GABRB1P18505 474 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 NME2P22392 152 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 TCEA1P23193 301 aaKnown RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 RPL5P46777 297 aaKnown RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 GPR85P60893 370 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 RPS4XP62701 263 aaKnown RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 INPP5JQ15735 1006 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 SGCBQ16585 318 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 KLHL22Q53GT1 634 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 EMC4Q5J8M3 183 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 GPR139Q6DWJ6 353 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 JAZF1Q86VZ6 243 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 GID4Q8IVV7 300 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 STX19Q8N4C7 294 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 LRRC17Q8N6Y2 441 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 POC1BQ8TC44 478 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 APH1BQ8WW43 257 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 UBE2FQ969M7 185 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 OTULINQ96BN8 352 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF524Q96C55 264 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 LRR1Q96L50 414 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 MOGAT1Q96PD6 335 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 SIGLEC12Q96PQ1 595 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 GPX7Q96SL4 187 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 COPS4Q9BT78 406 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF552Q9H707 407 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-227ENST00000475832 KLHL1Q9NR64 748 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 CMC2Q9NRP2 79 aa11.04□□□□□ -0.64
MRPL55-227ENST00000475832 ALKBH4Q9NXW9 302 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms