RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 SLC43A2Q8N370 569 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 KCNG3Q8TAE7 436 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 HRASLS5Q96KN8 279 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.17□□□□□ -0.94
SPEN-201ENST00000375759 SCN3AQ9NY46 2000 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 C1orf105O95561 183 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 GASTP01350 101 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 OMGP23515 440 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 GLYR1Q49A26 553 aaPredicted RBP9.17□□□□□ -0.94
SPEN-201ENST00000375759 MEX3DQ86XN8 651 aaKnown RBP9.17□□□□□ -0.94
SPEN-201ENST00000375759 C1orf87Q8N0U7 546 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 LRRC15Q8TF66 581 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 SCARB1Q8WTV0 552 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 BRI3BPQ8WY22 251 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 ZNF582Q96NG8 517 aaPredicted RBP9.17□□□□□ -0.94
SPEN-201ENST00000375759 EXOSC3Q9NQT5 275 aaKnown RBP9.17□□□□□ -0.94
SPEN-201ENST00000375759 IL17CQ9P0M4 197 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 VDAC3Q9Y277 283 aa9.17□□□□□ -0.94
SPEN-201ENST00000375759 TRBV4-1A0A0J9YWV2 114 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 GLSO94925 669 aaPredicted RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 ZMAT1Q5H9K5 638 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 C5orf46Q6UWT4 87 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 SLC6A17Q9H1V8 727 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 POFUT1Q9H488 388 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 MYOTQ9UBF9 498 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 MGST1P10620 155 aaKnown RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 CHRNB4P30926 498 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 RPE65Q16518 533 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 PCDHGA1Q9Y5H4 931 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 AADACP22760 399 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 DDOSTP39656 456 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 DCAF7P61962 342 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 SHEQ5VZ18 495 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 MDGA2Q7Z553 956 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 MYO5AQ9Y4I1 1855 aaKnown RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 NPIPB15A6NHN6 443 aaPredicted RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 ZNF217O75362 1048 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 TRAPPC2P0DI81 140 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 TRAPPC2BP0DI82 140 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 CD70P32970 193 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 MTCP1P56278 107 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 ZNF684Q5T5D7 378 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 CPEB1Q9BZB8 566 aaKnown RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 KDM4EB2RXH2 506 aaPredicted RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 HTR1FP30939 366 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 BTG1P62324 171 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 GGTA1PQ4G0N0 100 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 CGB2Q6NT52 195 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 PCYT2Q99447 389 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 ATG2BQ96BY7 2078 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 MCRIP1C9JLW8 97 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 SGK494L7N484 410 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 DFFBO76075 338 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 CD53P19397 219 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 IDUAP35475 653 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 SLC5A12Q1EHB4 618 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 NXNL2Q5VZ03 156 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 GPR26Q8NDV2 337 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 C3orf30Q96M34 536 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 LRRC37A3O60309 1634 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 DPP4P27487 766 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 DUSP6Q16828 381 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 MRPL2Q5T653 305 aaKnown RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 OR7E24Q6IFN5 339 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 TRPM6Q9BX84 2022 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 LRP5LA4QPB2 252 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 ANKRD34BA5PLL1 514 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 HEPACAM2A8MVW5 462 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 TFAP2AP05549 437 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 ALDOCP09972 364 aaKnown RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 ANXA7P20073 488 aaKnown RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 TRHRP34981 398 aaPredicted RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 XCR1P46094 333 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 NDUFA6P56556 154 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 RPS25P62851 125 aaKnown RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 SIAH3Q8IW03 269 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 DMBX1Q8NFW5 382 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 PDLIM5Q96HC4 596 aaKnown RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 GALNT9Q9HCQ5 603 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 ISYNA1Q9NPH2 558 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 CPMP14384 443 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 NME2P22392 152 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 P2RX1P51575 399 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 ZNF133P52736 654 aaPredicted RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 RAB35Q15286 201 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 ZNF789Q5FWF6 425 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 SYT6Q5T7P8 510 aaPredicted RBP9.16□□□□□ -0.94
SPEN-201ENST00000375759 STEAP1BQ6NZ63 245 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 FJX1Q86VR8 437 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 OR52R1Q8NGF1 315 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 CRB3Q9BUF7 120 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 ADAM29Q9UKF5 820 aa9.16□□□□□ -0.94
SPEN-201ENST00000375759 GABARAPH6UMI1 98 aa9.15□□□□□ -0.94
SPEN-201ENST00000375759 GABARAPO95166 117 aa9.15□□□□□ -0.94
SPEN-201ENST00000375759 SEMA4FO95754 770 aa9.15□□□□□ -0.94
SPEN-201ENST00000375759 SPI1P17947 270 aa9.15□□□□□ -0.94
SPEN-201ENST00000375759 SMN1Q16637 294 aaKnown RBP9.15□□□□□ -0.94
SPEN-201ENST00000375759 Q499Y3 187 aa9.15□□□□□ -0.94
SPEN-201ENST00000375759 TMEM31Q5JXX7 168 aa9.15□□□□□ -0.94
SPEN-201ENST00000375759 OR2G6Q5TZ20 316 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms