RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 OR51E2Q9H255 320 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 TMEM9BQ9NQ34 198 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 RASD1Q9Y272 281 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 A0A1W2PPV4 95 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 BCAS1O75363 584 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-202ENST00000342494 SLCO2B1O94956 709 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 NXPH2O95156 264 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 GSTP1P09211 210 aaKnown RBP13.9□□□□□ -0.18
UBE3B-202ENST00000342494 LTBQ06643 244 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 ESPNLQ6ZVH7 1005 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 ANKRD13BQ86YJ7 626 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 TM4SF18Q96CE8 201 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 SLC29A1Q99808 456 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 PGAP2Q9UHJ9 254 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 TMEM72A0PK05 275 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 PRAMEF27A3QJZ7 478 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 ARPC1BO15143 372 aaKnown RBP13.9□□□□□ -0.18
UBE3B-202ENST00000342494 APOC3P02656 99 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 EIF4EP06730 217 aaKnown RBP13.9□□□□□ -0.18
UBE3B-202ENST00000342494 LIPCP11150 499 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 TSFMP43897 325 aaKnown RBP13.9□□□□□ -0.18
UBE3B-202ENST00000342494 ALDH3B2P48448 385 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 PRAMEF9Q5VWM5 478 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 OR14K1Q8NGZ2 314 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 PPIL3Q9H2H8 161 aaKnown RBP13.9□□□□□ -0.18
UBE3B-202ENST00000342494 TRBV4-1A0A0J9YWV2 114 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 ANKRD33BA6NCL7 494 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 TBC1D28Q2M2D7 210 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 FAM69AQ5T7M9 428 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 AADACL3Q5VUY0 350 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 FAM198BQ6UWH4 519 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 BIRC8Q96P09 236 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 NRSN2Q9GZP1 204 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 GLIPR2Q9H4G4 154 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 SERTAD4Q9NUC0 356 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 ENPP5Q9UJA9 477 aa13.9□□□□□ -0.18
UBE3B-202ENST00000342494 A0A0U1RQK1 487 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 A0A1B0GWA3 101 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 A0A1W2PPH5 198 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 A0A1W2PQ09 198 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 UBFD1O14562 309 aaKnown RBP13.89□□□□□ -0.19
UBE3B-202ENST00000342494 KCNAB1Q14722 419 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 C6orf183Q5T699 404 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 TMEM71Q6P5X7 295 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 IP6K3Q96PC2 410 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 OCSTAMPQ9BR26 566 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 THAP7Q9BT49 309 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-202ENST00000342494 HRASLSQ9HDD0 168 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 NUMA1Q14980 2115 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 GAPDHSO14556 408 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-202ENST00000342494 ARPC5O15511 151 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 TFP02787 698 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 SERPINA7P05543 415 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 ALDOCP09972 364 aaKnown RBP13.89□□□□□ -0.19
UBE3B-202ENST00000342494 EDDM3BP56851 147 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 YOD1Q5VVQ6 348 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-202ENST00000342494 METRNLQ641Q3 311 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 STEAP3Q658P3 488 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 KCTD11Q693B1 232 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 FRMD1Q8N878 549 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 ZNF454Q8N9F8 522 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 BOD1Q96IK1 185 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 ARRDC1-AS1Q9H2J1 176 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 ATG4BQ9Y4P1 393 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 NUBP2Q9Y5Y2 271 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 TMEM202A6NGA9 273 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 A8MXE2 369 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 ITGAMP11215 1152 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 LEXMQ3ZCV2 418 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 METAP1DQ6UB28 335 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-202ENST00000342494 MBOAT2Q6ZWT7 520 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 HYLS1Q96M11 299 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 EDEM2Q9BV94 578 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 FAM117AQ9C073 453 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 B3GAT1Q9P2W7 334 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 IGLV3-10A0A075B6K4 115 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 A8MVM7 634 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 GPRIN2O60269 458 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 TAS2R46P59540 309 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 ELAVL1Q15717 326 aaKnown RBP13.89□□□□□ -0.19
UBE3B-202ENST00000342494 OR52W1Q6IF63 320 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 MIB2Q96AX9 1013 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 TBC1D29Q9UFV1 150 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 DPM1O60762 260 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 HENMT1Q5T8I9 393 aaKnown RBP13.89□□□□□ -0.19
UBE3B-202ENST00000342494 PLPP6Q8IY26 295 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 OR56B1Q8NGI3 324 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 TIMD4Q96H15 378 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 CPPED1Q9BRF8 314 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-202ENST00000342494 EGLN1Q9GZT9 426 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 CXorf36Q9H7Y0 433 aa13.89□□□□□ -0.19
UBE3B-202ENST00000342494 KITLGP21583 273 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 PTAFRP25105 342 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 GABREP78334 506 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 GAB1Q13480 694 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 SELPLGQ14242 412 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 MED20Q9H944 212 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 TMEM212A6NML5 194 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 PRAF2O60831 178 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 IL3RAP26951 378 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms