RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PON3Q15166 354 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 DEFB110Q30KQ9 67 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 HEPHL1Q6MZM0 1159 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZAR1Q86SH2 424 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 RNF113BQ8IZP6 322 aaKnown RBP15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 OR2L13Q8N349 312 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 RPLP0P6Q8NHW5 317 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 OR1E3Q8WZA6 343 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 MS4A3Q96HJ5 214 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZNF285Q96NJ3 590 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 GPR174Q9BXC1 333 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 DCAF16Q9NXF7 216 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 A0A1B0GWA3 101 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 GMFGO60234 142 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 KHDRBS3O75525 346 aaKnown RBP15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 MAGEB1P43366 347 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 PITPNAQ00169 270 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 GPM6BQ13491 265 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 COL28A1Q2UY09 1125 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 AKIRIN2Q53H80 203 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 TPRA1Q86W33 373 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 IL21RQ9HBE5 538 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 MEPEQ9NQ76 525 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 KCNE5Q9UJ90 142 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 SLC17A4Q9Y2C5 497 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 ADAM18Q9Y3Q7 739 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 PRICKLE3O43900 615 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 LY86O95711 162 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 FAM157BP0CG42 384 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 PEPDP12955 493 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 ATF1P18846 271 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZNHIT3Q15649 155 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZNF542PQ5EBM4 170 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 SFRP5Q5T4F7 317 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 RTL10Q7L3V2 364 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 CDH26Q8IXH8 852 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 HSPA12BQ96MM6 686 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 OR10H1Q9Y4A9 318 aa15.2■□□□□ 0.02
CDC42EP4-201ENST00000335793 ACOD1A6NK06 481 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 CCDC85CA6NKD9 419 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 H0YGG7 62 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 PLPP2O43688 288 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 SULT1B1O43704 296 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 SERPINA3P01011 423 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 ARF3P61204 181 aaPredicted RBP15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 BTG1P62324 171 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 BDH1Q02338 343 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 FZD5Q13467 585 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 ODF4Q2M2E3 257 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 RPL13AP3Q6NVV1 102 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 GATSQ8NAP1 163 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 OR10A4Q9H209 315 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 ADGRL4Q9HBW9 690 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 GSN-AS1Q9NRJ2 163 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 COA4Q9NYJ1 87 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 C19orf53Q9UNZ5 99 aaPredicted RBP15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 HOXB1P14653 301 aaPredicted RBP15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 TYRP1P17643 537 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 SOX2P48431 317 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 CAPZA1P52907 286 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 PPP2CBP62714 309 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 PPP2CAP67775 309 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZNF85Q03923 595 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 SRSF5Q13243 272 aaKnown RBP15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 TRAM1Q15629 374 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 PLA1AQ53H76 456 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 COL13A1Q5TAT6 717 aaPredicted RBP15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 OR52R1Q8NGF1 315 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 LRRC46Q96FV0 321 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 RBM18Q96H35 190 aaKnown RBP15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 DERL3Q96Q80 235 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZNF350Q9GZX5 532 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 AUNIPQ9H7T9 357 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 NUBP2Q9Y5Y2 271 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 ANKRD61A6NGH8 418 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 BLOC1S5-TXNDC5H3BN57 136 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 THBS1P07996 1170 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 HIST1H1CP16403 213 aaKnown RBP15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 PGDP52209 483 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 NRG3P56975 720 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 RBMS3Q6XE24 437 aaKnown RBP15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 LGALS14Q8TCE9 139 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 SPSB2Q99619 263 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 KIR3DX1Q9H7L2 352 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 HRASLS2Q9NWW9 162 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 PFDN2Q9UHV9 154 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 ZMIZ1Q9ULJ6 1067 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 FLVCR2Q9UPI3 526 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 FKBP7Q9Y680 259 aa15.19■□□□□ 0.02
CDC42EP4-201ENST00000335793 UGT2B7P16662 529 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 TSPAN5P62079 268 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 ACTC1P68032 377 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 ACTA1P68133 377 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 SERTAD2Q14140 314 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 NDUFAF6Q330K2 333 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 C1orf53Q5VUE5 145 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 TMEM52Q8NDY8 209 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 OR4N2Q8NGD1 307 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 MOSPD2Q8NHP6 518 aa15.18■□□□□ 0.02
CDC42EP4-201ENST00000335793 C1orf216Q8TAB5 229 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms