RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 ARFIP2P53365 341 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 MAPK11Q15759 364 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 TMEM176BQ3YBM2 270 aaPredicted RBP11.52□□□□□ -0.57
SYCN-201ENST00000318438 Q6ZT83 130 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 HMGN2P46Q86SG4 172 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 PEX5LQ8IYB4 626 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 ARFGAP2Q8N6H7 521 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 ZNF540Q8NDQ6 660 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 OR52N5Q8NH56 324 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 ZNF563Q8TA94 476 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 SLC25A43Q8WUT9 341 aaPredicted RBP11.52□□□□□ -0.57
SYCN-201ENST00000318438 MRPL24Q96A35 216 aaKnown RBP11.52□□□□□ -0.57
SYCN-201ENST00000318438 FBXO17Q96EF6 278 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 SNX18Q96RF0 628 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 SRXN1Q9BYN0 137 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 RAD21L1Q9H4I0 556 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 RABEP2Q9H5N1 569 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 SLC52A3Q9NQ40 469 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 SERINC1Q9NRX5 453 aa11.52□□□□□ -0.57
SYCN-201ENST00000318438 TMEM247A6NEH6 219 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 OR5H1A6NKK0 313 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 CLIC1O00299 241 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 LILRA1O75019 489 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 PRKD3O94806 890 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 YES1P07947 543 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 ARAFP10398 606 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 BMP2P12643 396 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 IL7RP16871 459 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 IGHV1-2P23083 117 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 PTAFRP25105 342 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 APOBEC1P41238 236 aaKnown RBP11.51□□□□□ -0.57
SYCN-201ENST00000318438 LIMS1P48059 325 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 DVL1P1P54792 670 aaPredicted RBP11.51□□□□□ -0.57
SYCN-201ENST00000318438 MERTKQ12866 999 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 RGNQ15493 299 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 MST1LQ2TV78 715 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 LIN52Q52LA3 116 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 MRPL2Q5T653 305 aaKnown RBP11.51□□□□□ -0.57
SYCN-201ENST00000318438 USP43Q70EL4 1123 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 GRINAQ7Z429 371 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 ATP6V1C2Q8NEY4 427 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 SLC38A5Q8WUX1 472 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 CNOT9Q92600 299 aaKnown RBP11.51□□□□□ -0.57
SYCN-201ENST00000318438 CCDC106Q9BWC9 280 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 NPHS2Q9NP85 383 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 SLC25A37Q9NYZ2 338 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 DCTN4Q9UJW0 460 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 TRIM33Q9UPN9 1127 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 SPIN1Q9Y657 262 aaPredicted RBP11.51□□□□□ -0.57
SYCN-201ENST00000318438 GMEB1Q9Y692 573 aa11.51□□□□□ -0.57
SYCN-201ENST00000318438 M0R1B8 84 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 FAAHO00519 579 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 TACSTD2P09758 323 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 UQCRBP14927 111 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 PCMT1P22061 227 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 PPIBP23284 216 aaKnown RBP11.5□□□□□ -0.57
SYCN-201ENST00000318438 ZFP36P26651 326 aaKnown RBP11.5□□□□□ -0.57
SYCN-201ENST00000318438 FKBP2P26885 142 aaKnown RBP11.5□□□□□ -0.57
SYCN-201ENST00000318438 APOBEC3AP31941 199 aaPredicted RBP11.5□□□□□ -0.57
SYCN-201ENST00000318438 RYKP34925 604 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 HTR3AP46098 478 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 RAC3P60763 192 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 SCGB2A2Q13296 93 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 CCNIQ14094 377 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 SWI5Q1ZZU3 235 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 AGKQ53H12 422 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 SYT14P1Q58G82 188 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 PAGE3Q5JUK9 113 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 RNF220Q5VTB9 566 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 PRAMEF8Q5VWM4 474 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 PRAMEF7Q5VXH5 474 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 SHQ1Q6PI26 577 aaKnown RBP11.5□□□□□ -0.57
SYCN-201ENST00000318438 KLHL17Q6TDP4 642 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 FCRLAQ7L513 359 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 P2RY8Q86VZ1 359 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 MSRB3Q8IXL7 192 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 ZNF440Q8IYI8 595 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 SLC43A2Q8N370 569 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 HPS1Q92902 700 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 THOC1Q96FV9 657 aaKnown RBP11.5□□□□□ -0.57
SYCN-201ENST00000318438 TMEM19Q96HH6 336 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 VRK1Q99986 396 aaPredicted RBP11.5□□□□□ -0.57
SYCN-201ENST00000318438 C1QTNF6Q9BXI9 259 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 ZNF385DQ9H6B1 395 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 MYOZ1Q9NP98 299 aaPredicted RBP11.5□□□□□ -0.57
SYCN-201ENST00000318438 A4GALTQ9NPC4 353 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 CHRNA9Q9UGM1 479 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 PRDM4Q9UKN5 801 aa11.5□□□□□ -0.57
SYCN-201ENST00000318438 TRBV5-3A0A0A0MS03 114 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 A0A0G2JND7 137 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 A0A0G2JPF8 293 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 A0A1W2PNR3 127 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 CDHR4A6H8M9 788 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 CFAP73A6NFT4 308 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 HNRNPCL2B2RXH8 293 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 HNRNPCL3B7ZW38 293 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 HNRNPCL1O60812 293 aaKnown RBP11.49□□□□□ -0.57
SYCN-201ENST00000318438 RAD51DO75771 328 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 PGM3O95394 542 aa11.49□□□□□ -0.57
SYCN-201ENST00000318438 STAMBPO95630 424 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms