RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Slc35f4Q8BZK4 485 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Rbm4Q8C7Q4 361 aaKnown RBP8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 HopxQ8R1H0 73 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Vmn1r17Q8R2D8 303 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Gstm4Q8R5I6 218 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Rbm4bQ8VE92 357 aaKnown RBP8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Olfr922Q8VG50 311 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Olfr651Q8VG78 313 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 OptcQ920A0 328 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Polr2hQ923G2 150 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Rcbtb2Q99LJ7 551 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Wdsub1Q9D0I6 474 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 4933428M09RikQ9D3X3 192 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 PaicsQ9DCL9 425 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Stk19Q9JHN8 254 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Acss2Q9QXG4 701 aa8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Usp24B1AY13 2617 aaKnown RBP8.04□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Trbc1A0A0A6YWV4 173 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Lrp3E9Q1T6 790 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 C3ar1O09047 477 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Clcn7O70496 803 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 P01852 173 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Hsd3b3P26150 373 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Pou1f1Q00286 291 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 PkibQ04758 92 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Alg11Q3TZM9 492 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Sorbs2Q3UTJ2 1180 aaKnown RBP8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Ankrd42Q3V096 527 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Mtmr11Q3V1L6 700 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Commd6Q3V4B5 87 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Clhc1Q5M6W3 596 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Sidt1Q6AXF6 827 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Ckmt2Q6P8J7 419 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Olfr297Q7TS07 310 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Slc36a3Q811P0 477 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Pcyt1bQ811Q9 369 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Lrrc39Q8BGI7 337 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Q8BH50 245 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Clba1Q8BHN9 321 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Sdhaf4Q8BTE0 104 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Lypd4Q8BVP6 246 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Ctdsp2Q8BX07 270 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Q8CDS7 251 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Nkiras1Q8CEC5 192 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 BanpQ8VBU8 548 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Abhd14bQ8VCR7 210 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Dhrs4Q99LB2 279 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Tktl1Q99MX0 595 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Tmed5Q9CXE7 229 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 PacrglQ9D3X5 248 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Ninj2Q9JL89 143 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Dok3Q9QZK7 444 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Chek2Q9Z265 546 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Ighv1-78A0A0G2JGN3 117 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 A26c2A0A140LHE4 291 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Vmn2r90E9PXJ8 863 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Vmn1r77E9PY60 306 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Vmn2r101E9PZS9 857 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Gm17615E9Q9P2 165 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Vmn1r25H3BLP0 302 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Ntn1O09118 604 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 MndaP0DOV1 425 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Tcea1P10711 301 aaKnown RBP8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 LynP25911 512 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 VipP32648 170 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Eif1P48024 113 aaKnown RBP8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Bglap3P54615 95 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Slc16a3P57787 470 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Cmklr1P97468 371 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 MpgQ04841 333 aaKnown RBP8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Nutm2Q3V0C3 733 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Mrm3Q5ND52 418 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Zdhhc8Q5Y5T5 762 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Tas2r140Q7TQA4 312 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Piwil2Q8CDG1 971 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 H1fntQ8CJI4 398 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Vmn1r208Q8R275 308 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Olfr214Q8VG27 320 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Cela3bQ9CQ52 269 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Med31Q9CXU1 131 aaKnown RBP8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 CutalQ9D1U5 156 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Adad2Q9D5P4 478 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Med11Q9D8C6 117 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Paqr4Q9JJE4 273 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Tmeff2Q9QYM9 374 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Ramp3Q9WUP1 147 aa8.03□□□□□ -1.12
Ccdc28a-201ENSMUST00000052648 Shank1D3YZU1 2167 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Asxl3Q8C4A5 2259 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Olfr239A0PK55 315 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Mllt6B1AR10 1109 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Zar1lC3VD30 291 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Lrr1D3YY91 422 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Olfr376E9Q4M1 320 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Olfr730E9Q8M3 318 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 4933403O08RikF6UK53 379 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Gm379J3QQ19 296 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Olfr55K7N6Q1 315 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 PdgfaP20033 211 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Nsg2P47759 171 aa8.02□□□□□ -1.13
Ccdc28a-201ENSMUST00000052648 Cldn18P56857 264 aa8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms