RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Crlf2Q8CII9 359 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Tm6sf2Q8R1J1 378 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Vmn1r32Q8R2D9 302 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Abhd17cQ8VCV1 320 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Cbx7Q8VDS3 158 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Sucnr1Q99MT6 317 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 4930553M12RikQ9CUH1 165 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Elovl4Q9EQC4 312 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Raet1dQ9JI58 249 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Kcnj10Q9JM63 379 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Zfp236S4R299 1847 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Arid2E9Q7E2 1828 aa11.52□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Hdac3O88895 424 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Hoxa10P31310 416 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Slc6a12P31651 614 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Limk1P53668 647 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 P58686 83 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Slc2a9Q3T9X0 538 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 HpQ61646 347 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Pon3Q62087 354 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Olfr1115Q7TR53 326 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Dsg1cQ7TSF0 911 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 PcgF3Q8BTQ0 241 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 AspnQ99MQ4 373 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Tex13aA2AFS9 377 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 H2-T23P06339 357 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 IapP24822 559 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 SnrpbP27048 231 aaKnown RBP11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 VegfbP49766 207 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Rack1P68040 317 aaKnown RBP11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Fgf13P70377 245 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Mmp25Q3U435 615 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Pou4f3Q63955 338 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Ranbp3lQ6PDH4 491 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Olfr728Q7TRM6 311 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 DgkzQ80UP3 929 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Otop1Q80VM9 600 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Olfr70Q80ZX9 316 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Slc6a17Q8BJI1 727 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Tram1Q91V04 374 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Cir1Q9DA19 450 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Fgf20Q9ESL9 211 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Ak4Q9WUR9 223 aaKnown RBP11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Ralgapa2A3KGS3 1872 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Gm28557A0A087WQQ0 336 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Gm29797A0A140LIA7 188 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Zfp995E9Q6M3 437 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Gm6460F6YJZ8 199 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Pcdh1F7BJK1 1077 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Vmn1r20K7N778 303 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Vmn2r13L7N1X2 831 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Hnrnpa2b1O88569 353 aaKnown RBP11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Gpr52P0C5J4 361 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 ActbP60710 375 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Btg1P62325 171 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Actg1P63260 375 aaKnown RBP11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Slc22a18Q78KK3 406 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Olfr835Q7TRG7 311 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Megf11Q80T91 1091 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Kctd20Q8CDD8 419 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Mtnr1bQ8CIQ6 364 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Ndrg2Q9QYG0 371 aaKnown RBP11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Klhl15A2AAX3 604 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Gm1330D3Z460 184 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Gm21103E9Q2Q1 267 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Spata31d1cE9QAF1 853 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 CpoxP36552 443 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 RabggtbP53612 339 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 UqcrhP99028 89 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Nt5c3bQ3UFY7 300 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Olfr1167Q7TR26 316 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Kctd9Q80UN1 339 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Adam30Q811Q3 732 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 4933402N03RikQ8CDT9 329 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Rasgef1bQ8JZL7 473 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Tor3aQ9ER38 385 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Dok3Q9QZK7 444 aa11.51□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Vmn1r90A0A087WR36 309 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Olfr576A0A0G2JFH3 312 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Ino80eA0A0U1RP99 260 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Mamdc4A2AJA7 1228 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Gm11127A7VMS2 374 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Skint2A7XUX6 400 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Aqp2P56402 271 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Gpr39Q5U431 456 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Ahsa1Q8BK64 338 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Eif1axQ8BMJ3 144 aaKnown RBP11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Irf2bplQ8K3X4 775 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Rab38Q8QZZ8 211 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Olfr272Q8VGA0 319 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Olfr539Q8VGL9 319 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Pfn4Q9D6I3 129 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Slc46a3Q9DC26 460 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Isyna1Q9JHU9 557 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Cnot9Q9JKY0 299 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 CalcrlQ9R1W5 463 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 PlpbpQ9Z2Y8 274 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 SktA2AQ25 1946 aaKnown RBP11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 Gm28710A0A1B0GR31 962 aa11.5□□□□□ -0.57
Pdlim5-201ENSMUST00000029941 KitlgP20826 273 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms