RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	FLT3LG	P49771	235 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	ASCL1	P50553	236 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	RUNX2	Q13950	521 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	DPYSL3	Q14195	570 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	BATF	Q16520	125 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	RFTN2	Q52LD8	501 aa	Predicted RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TREML2	Q5T2D2	321 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	KCNIP4	Q6PIL6	250 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	UQCC3	Q6UW78	93 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	C17orf99	Q6UX52	265 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	FAM220A	Q7Z4H9	259 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TRIM46	Q7Z4K8	759 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	GDF7	Q7Z4P5	450 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	KLHDC8B	Q8IXV7	354 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	SPATA33	Q96N06	139 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF426	Q9BUY5	554 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	NMRAL1	Q9HBL8	299 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	C1GALT1	Q9NS00	363 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	PITPNC1	Q9UKF7	332 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	LAMA4	Q16363	1823 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	MON2	Q7Z3U7	1717 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	USP6	P35125	1406 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072		A0A1W2PRX2	142 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TMEM218	A2RU14	115 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	BBIP1	A8MTZ0	92 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF705G	A8MUZ8	300 aa	Predicted RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072		H0Y980	276 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072		K7ERU9	68 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	CLEC3A	O75596	197 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	YIF1A	O95070	293 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	ADRA2C	P18825	462 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	SDC4	P31431	198 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	CD81	P60033	236 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	RPS16	P62249	146 aa	Known RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	SPOCK1	Q08629	439 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR5I1	Q13606	314 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	VMAC	Q2NL98	169 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	C18orf21	Q32NC0	220 aa	Predicted RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	UNQ6494/PRO21346	Q6UXR6	183 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	FAM126B	Q8IXS8	530 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	JAGN1	Q8N5M9	183 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TMEM161B	Q8NDZ6	487 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR52B4	Q8NGK2	314 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	DCAF4	Q8WV16	495 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	CNTNAP3B	Q96NU0	1288 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TMEM209	Q96SK2	561 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	RHNO1	Q9BSD3	238 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TBL1XR1	Q9BZK7	514 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	ISYNA1	Q9NPH2	558 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	DLL4	Q9NR61	685 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	C2orf42	Q9NWW7	574 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	RBPJL	Q9UBG7	517 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR52A1	Q9UKL2	312 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	LHX6	Q9UPM6	363 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	ANGPT4	Q9Y264	503 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	WDR81	Q562E7	1941 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	LMTK3	Q96Q04	1460 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	KDM4F	A0A1W2PPD8	638 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	TTC24	A2A3L6	582 aa	Predicted RBP	5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072		F6UZH7	168 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	MT-CO2	P00403	227 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	PGAM1	P18669	254 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	MAK	P20794	623 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	UQCRC2	P22695	453 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	ARRB2	P32121	409 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	OTX1	P32242	354 aa	Predicted RBP	5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	CEACAM6	P40199	344 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	RAB9A	P51151	201 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	EFNA3	P52797	238 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	HCCS	P53701	268 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	PPP3R1	P63098	170 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	EVX2	Q03828	476 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	RAB32	Q13637	225 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	CDCP2	Q5VXM1	449 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	TRMT10B	Q6PF06	316 aa	Known RBP	5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	HACD2	Q6Y1H2	254 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR52N4	Q8NGI2	321 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR5D13	Q8NGL4	314 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	ASB17	Q8WXJ9	295 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	SHISA4	Q96DD7	197 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZC3HAV1L	Q96H79	300 aa	Known RBP	5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	TGM7	Q96PF1	710 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	F2RL3	Q96RI0	385 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	RTP3	Q9BQQ7	232 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	NICN1	Q9BSH3	213 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	WRAP53	Q9BUR4	548 aa	Known RBP	5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	BOC	Q9BWV1	1114 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	FGFBP2	Q9BYJ0	223 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	TMEM134	Q9H6X4	195 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	RPS10P5	Q9NQ39	176 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	EMCN	Q9ULC0	261 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZDHHC8	Q9ULC8	765 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	ALK	Q9UM73	1620 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	NAV1	Q8NEY1	1877 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	GON4L	Q3T8J9	2241 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	SMCO3	A2RU48	225 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	LIPT2	A6NK58	231 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	NCR1	O76036	304 aa		5.68	□□□□□ -1.5
NECAP1-222	ENST00000640072	STBD1	O95210	358 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms