RNA–Protein interactions for RNA: ENST00000619352.4

HMGN2-210, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-210ENST00000619352 ZFHX4Q86UP3 3567 aa4.76□□□□□ -1.65
HMGN2-210ENST00000619352 CNOT1A5YKK6 2376 aaKnown RBP4.76□□□□□ -1.65
HMGN2-210ENST00000619352 ANAPC1Q9H1A4 1944 aa4.76□□□□□ -1.65
HMGN2-210ENST00000619352 SDK1Q7Z5N4 2213 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 FRYLO94915 3013 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 IGHV4OR15-8A0A075B7B6 117 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 A0A0J9YVX5 310 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 A0A0J9YYE9 177 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 TRBV11-1A0A0K0K1C0 115 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 SMIM28A0A1B0GU29 152 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 SMCO3A2RU48 225 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 OR5H15A6NDH6 313 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 PRR23D1E9PI22 279 aaPredicted RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 EI24O14681 340 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 CETN3O15182 167 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 KHDRBS3O75525 346 aaKnown RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 KRT36O76013 467 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 SEC24AO95486 1093 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 TRBC1P01850 177 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 GPIP06744 558 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 PRR23D2P0DMB1 279 aaPredicted RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 PSMC3P17980 439 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 TNNI1P19237 187 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 SRMP19623 302 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 MMP11P24347 488 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 U2AF2P26368 475 aaKnown RBP eCLIP4.75□□□□□ -1.651e-38■■■□□ 16.2
HMGN2-210ENST00000619352 RDXP35241 583 aaKnown RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 RPS5P46782 204 aaKnown RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 STARP49675 285 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 ATP1B3P54709 279 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 RAG2P55895 527 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 PEX3P56589 373 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 YWHAGP61981 247 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 TWF1Q12792 350 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 ORC2Q13416 577 aaPredicted RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 SNTA1Q13424 505 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 SLC17A1Q14916 467 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 TEAD2Q15562 447 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 TWIST1Q15672 202 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 XKR4Q5GH76 650 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 TMEM53Q6P2H8 277 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 SLC25A47Q6Q0C1 308 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 BTNL3Q6UXE8 466 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 HACD2Q6Y1H2 254 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 Q71RC1 249 aaPredicted RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 CCDC50Q8IVM0 306 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 CSGALNACT2Q8N6G5 542 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 OR2L3Q8NG85 312 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 OR7G2Q8NG99 324 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 OR6F1Q8NGZ6 308 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 ZNF461Q8TAF7 563 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 GPX8Q8TED1 209 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 KIFAP3Q92845 792 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 SMARCD2Q92925 531 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 ART4Q93070 314 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 C18orf25Q96B23 403 aaPredicted RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 HMCESQ96FZ2 354 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 DUX5Q96PT3 197 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 PSD2Q9BQI7 771 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 ILKAPQ9H0C8 392 aaPredicted RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 MTHFD2LQ9H903 347 aaPredicted RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 ANKRA2Q9H9E1 313 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 ZNF334Q9HCZ1 680 aaPredicted RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 MRPS30Q9NP92 439 aaKnown RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 POLE4Q9NR33 117 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 IKZF2Q9UKS7 526 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 PPP2R2CQ9Y2T4 447 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 EXOSC1Q9Y3B2 195 aaKnown RBP4.75□□□□□ -1.65
HMGN2-210ENST00000619352 PTPRDP23468 1912 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 USP24Q9UPU5 2620 aa4.75□□□□□ -1.65
HMGN2-210ENST00000619352 TNRC6BQ9UPQ9 1833 aaKnown RBP4.74□□□□□ -1.65
HMGN2-210ENST00000619352 LOC100506127A0A0U1RQW1 187 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 LRP5LA4QPB2 252 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 FAM74A7A6NL05 159 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 HSBP1L1C9JCN9 74 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 K7ERI5 159 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 SOCS2O14508 198 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 CASKO14936 926 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 TM9SF1O15321 606 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 SRPX2O60687 465 aaPredicted RBP4.74□□□□□ -1.65
HMGN2-210ENST00000619352 OR2F2O95006 317 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 H6PDO95479 791 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 TOMM40O96008 361 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 IGHG3P01860 377 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 RETP07949 1114 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 OR4Q2P0C623 313 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 BCKDHAP12694 445 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 CCNB1P14635 433 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 KCNE1P15382 129 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 CCNE1P24864 410 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 CEACAM8P31997 349 aaPredicted RBP4.74□□□□□ -1.65
HMGN2-210ENST00000619352 DUSP3P51452 185 aaPredicted RBP4.74□□□□□ -1.65
HMGN2-210ENST00000619352 DAOAP59103 153 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 PLP1P60201 277 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 KLF9Q13886 244 aaPredicted RBP4.74□□□□□ -1.65
HMGN2-210ENST00000619352 GK3PQ14409 553 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 P2RY6Q15077 328 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 Q3ZCU0 254 aa4.74□□□□□ -1.65
HMGN2-210ENST00000619352 FAM74A3Q4VXF1 159 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms