RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 NENFQ9UMX5 172 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 TRAPPC1Q9Y5R8 145 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 NRMQ8IXM6 262 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 OR2G2Q8NGZ5 317 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 MMP26Q9NRE1 261 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 SIRT3Q9NTG7 399 aaPredicted RBP14.08□□□□□ -0.16
COL5A1-208ENST00000618395 MST1RQ04912 1400 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 GABARAPH6UMI1 98 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 HSBP1O75506 76 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 CLDN1O95832 211 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 COL5A1-AS1Q5SY13 56 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM135Q86UB9 458 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 PRDM7Q9NQW5 492 aa14.08□□□□□ -0.16
COL5A1-208ENST00000618395 ELOA3CA0A087WX78 387 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 A6NLC8 198 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 WNT7AO00755 349 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 AKR7A2O43488 359 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 TRAPPC6AO75865 159 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 JUNBP17275 347 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 THEM4Q5T1C6 240 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 ATG101Q9BSB4 218 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 SYT17Q9BSW7 474 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 FKRPQ9H9S5 495 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 IRF2P14316 349 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 SCN1AP35498 2009 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 RFX2P48378 723 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 ZMYND19Q96E35 227 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 PREX1Q8TCU6 1659 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 A6NDN8 102 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 ACTR1BP42025 376 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 FAM74A1Q5RGS3 127 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 WDR73Q6P4I2 378 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 MAMDC2Q7Z304 686 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 GNPNAT1Q96EK6 184 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 NECTIN4Q96NY8 510 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 SMIM7Q9BQ49 75 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 SOX7Q9BT81 388 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 FLVCR2Q9UPI3 526 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 WDR81Q562E7 1941 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 MED12Q93074 2177 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 GM2AP17900 193 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 APEX1P27695 318 aaKnown RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 ACTR1AP61163 376 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 SYT6Q5T7P8 510 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM182Q6ZP80 229 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 FAAP24Q9BTP7 215 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 ZDHHC4Q9NPG8 344 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 ANKRD66B4E2M5 251 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 GPR31O00270 319 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 CCSO14618 274 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 TTC32Q5I0X7 151 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 TRNP1Q6NT89 227 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 OR9A1PQ8NGU1 263 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM163Q8TC26 289 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 GJD4Q96KN9 370 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 MAP3K3Q99759 626 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 WDR18Q9BV38 432 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 SDR39U1Q9NRG7 319 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 PRODH2Q9UF12 536 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 SLC23A1Q9UHI7 598 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 TNFRSF1BP20333 461 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 CCR9P51686 369 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 AMZ1Q400G9 498 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 UNC5DQ6UXZ4 953 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 TMPRSS11FQ6ZWK6 438 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF761Q86XN6 746 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 FBXW5Q969U6 566 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 SIGLEC10Q96LC7 697 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 MN1Q10571 1320 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 PRAMEF27A3QJZ7 478 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 ADAM23O75077 832 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 MTNR1BP49286 362 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 PRAMEF9Q5VWM5 478 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 TMED6Q8WW62 240 aa14.07□□□□□ -0.16
COL5A1-208ENST00000618395 NSUN5Q96P11 429 aaKnown RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 FCF1Q9Y324 198 aaKnown RBP14.07□□□□□ -0.16
COL5A1-208ENST00000618395 PPRC1Q5VV67 1664 aaKnown RBP14.06□□□□□ -0.16
COL5A1-208ENST00000618395 SLC9B1P1A6NJY1 282 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 BET1O15155 118 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 SLC16A6O15403 523 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 IAH1Q2TAA2 248 aaPredicted RBP14.06□□□□□ -0.16
COL5A1-208ENST00000618395 NUS1Q96E22 293 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 MTCH1Q9NZJ7 389 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF98A6NK75 572 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 MEIS2O14770 477 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 CLEC3AO75596 197 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 EMP2P54851 167 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM218A2RU14 115 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 VEZF1Q14119 521 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 PRSS58Q8IYP2 241 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 EXD3Q8N9H8 876 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 OR52R1Q8NGF1 315 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 OR52N2Q8NGI0 321 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 GINS3Q9BRX5 216 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 CHRDL1Q9BU40 450 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 OR5V1Q9UGF6 321 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 PTGER4P35408 488 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 CTXN1P60606 82 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms