RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 VASNQ6EMK4 673 aa15.96■□□□□ 0.15
CNOT3-209ENST00000617930 GALNT6Q8NCL4 622 aa15.96■□□□□ 0.15
CNOT3-209ENST00000617930 ZNRF4Q8WWF5 429 aa15.96■□□□□ 0.15
CNOT3-209ENST00000617930 SGTBQ96EQ0 304 aa15.96■□□□□ 0.15
CNOT3-209ENST00000617930 TEAD3Q99594 435 aa15.96■□□□□ 0.15
CNOT3-209ENST00000617930 TM9SF2Q99805 663 aa15.96■□□□□ 0.15
CNOT3-209ENST00000617930 SRRQ9GZT4 340 aa15.96■□□□□ 0.15
CNOT3-209ENST00000617930 C4orf47A7E2U8 309 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 SCRG1O75711 98 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 PEPDP12955 493 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 IL7P13232 177 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 HPGDP15428 266 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 ZNF28P17035 718 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 ABCD3P28288 659 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 CCR4P51679 360 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 ZNF79Q15937 498 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 FAM69BQ5VUD6 431 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 RAB43Q86YS6 212 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 UBQLNLQ8IYU4 475 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 APCDD1LQ8NCL9 501 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 NFAM1Q8NET5 270 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-209ENST00000617930 MOGAT1Q96PD6 335 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 OR51V1Q9H2C8 321 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 TIGARQ9NQ88 270 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 EXOSC3Q9NQT5 275 aaKnown RBP15.95■□□□□ 0.14
CNOT3-209ENST00000617930 TOR4AQ9NXH8 423 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 H2AFY2Q9P0M6 372 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-209ENST00000617930 TNFRSF10DQ9UBN6 386 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 SRPK3Q9UPE1 567 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 EP300Q09472 2414 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-209ENST00000617930 LINC00854A0A1B0GVQ3 168 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 SLC35F4A4IF30 521 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 IDSB3KWA1 339 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 B4DXG7 233 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 HIST1H1CP16403 213 aaKnown RBP15.95■□□□□ 0.14
CNOT3-209ENST00000617930 BAK1Q16611 211 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 KLHL12Q53G59 568 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 WBP2NLQ6ICG8 309 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 ANKRD37Q7Z713 158 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 ZNF527Q8NB42 609 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 SPRYD4Q8WW59 207 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-209ENST00000617930 UFD1Q92890 307 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 OMA1Q96E52 524 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 KCTD7Q96MP8 289 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 NEDD4LQ96PU5 975 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 JAM3Q9BX67 310 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 COL25A1Q9BXS0 654 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-209ENST00000617930 ABCB9Q9NP78 766 aa15.95■□□□□ 0.14
CNOT3-209ENST00000617930 SIRT4Q9Y6E7 314 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-209ENST00000617930 A0A1W2PQ09 198 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 CLEC2LP0C7M8 214 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 HTR3AP46098 478 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 DCAF7P61962 342 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 RPS4XP62701 263 aaKnown RBP15.94■□□□□ 0.14
CNOT3-209ENST00000617930 SCN1BQ07699 218 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 GPR50Q13585 617 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 INSL4Q14641 139 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 SF3B4Q15427 424 aaKnown RBP eCLIP15.94■□□□□ 0.142e-6■□□□□ 10.4
CNOT3-209ENST00000617930 TAB1Q15750 504 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 TMEM44Q2T9K0 475 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 GID4Q8IVV7 300 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 ZNF440Q8IYI8 595 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 PSD4Q8NDX1 1056 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 OR4K13Q8NH42 304 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 MOSPD2Q8NHP6 518 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 ZPLD1Q8TCW7 415 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 ERMAPQ96PL5 475 aaPredicted RBP15.94■□□□□ 0.14
CNOT3-209ENST00000617930 DDOQ99489 341 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 TBX5Q99593 518 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 WDR77Q9BQA1 342 aaPredicted RBP15.94■□□□□ 0.14
CNOT3-209ENST00000617930 EDEM2Q9BV94 578 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 RARRES3Q9UL19 164 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 IER3IP1Q9Y5U9 82 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 TMEM200CA6NKL6 621 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 C12orf71A8MTZ7 269 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 PRR23D1E9PI22 279 aaPredicted RBP15.94■□□□□ 0.14
CNOT3-209ENST00000617930 GTPBP1O00178 669 aaKnown RBP15.94■□□□□ 0.14
CNOT3-209ENST00000617930 SLC30A4O14863 429 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 IDH3BO43837 385 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 OR7A10O76100 309 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 MRPL3P09001 348 aaKnown RBP15.94■□□□□ 0.14
CNOT3-209ENST00000617930 PRR23D2P0DMB1 279 aaPredicted RBP15.94■□□□□ 0.14
CNOT3-209ENST00000617930 SLC6A6P31641 620 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 RCVRNP35243 200 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 FABP5Q01469 135 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 PLCXD2Q0VAA5 305 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 ZNF322Q6U7Q0 402 aaPredicted RBP15.94■□□□□ 0.14
CNOT3-209ENST00000617930 NAXDQ8IW45 347 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 SYT14Q8NB59 555 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 OR52E2Q8NGJ4 325 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 C1GALT1C1Q96EU7 318 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 SLC7A5P2Q9GIP4 190 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 LAT2Q9GZY6 243 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 ADAM19Q9H013 955 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 ADGRL4Q9HBW9 690 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 ISYNA1Q9NPH2 558 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 DDX28Q9NUL7 540 aaKnown RBP15.94■□□□□ 0.14
CNOT3-209ENST00000617930 FAM86C1Q9NVL1 165 aa15.94■□□□□ 0.14
CNOT3-209ENST00000617930 DVL2O14641 736 aa15.93■□□□□ 0.14
CNOT3-209ENST00000617930 NDUFB2O95178 105 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms