RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 RAB28P51157 221 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 EPHA5P54756 1037 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ERVPABLB-1P60509 514 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 SPRED1Q7Z699 444 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 KLHDC8AQ8IYD2 350 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 PRR18Q8N4B5 295 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 KCNRGQ8N5I3 272 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 RNF141Q8WVD5 230 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 DIO2Q92813 273 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 GSX2Q9BZM3 304 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 ARL2-SNX15V9GYD0 113 aa8.14□□□□□ -1.11
CSMD1-216ENST00000602557 STC2O76061 302 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 OTX2P32243 289 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TEKQ02763 1124 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 RING1Q06587 406 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SPOCK1Q08629 439 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 OR10D4PQ8NGN7 298 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 L3HYPDHQ96EM0 354 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 C4orf36Q96KX1 117 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 CPNE7Q9UBL6 633 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SLC7A7Q9UM01 511 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 Q9Y3F1 56 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SNAI1O95863 264 aaPredicted RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 MPC1LP0DKB6 136 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 ELK1P19419 428 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PSPHP78330 225 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SCAPQ12770 1279 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TCEAL1Q15170 157 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM268Q5VZI3 342 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM123Q8N131 208 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 OR2T4Q8NH00 348 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SPNS1Q9H2V7 528 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PIGMQ9H3S5 423 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SLC45A1Q9Y2W3 748 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 LRP6O75581 1613 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PSMB1P20618 241 aaKnown RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SFTPDP35247 375 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 LTBQ06643 244 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 MEF2DQ14814 521 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 CD276Q5ZPR3 534 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SAT2Q96F10 170 aaPredicted RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 MEGF10Q96KG7 1140 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 ARHGAP9Q9BRR9 750 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SYT7O43581 403 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PGCP20142 388 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 GPX3P22352 226 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 POLR2IP36954 125 aaKnown RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 HNRNPA3P51991 378 aaKnown RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TAS2R19P59542 299 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 RCAN2Q14206 197 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 BORCS6Q96GS4 357 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TINAGL1Q9GZM7 467 aaPredicted RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 OR51B6Q9H340 312 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 MTCL1Q9Y4B5 1905 aaKnown RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 MPPED1O15442 326 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 FRS3O43559 492 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PCGF2P35227 344 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 DEFB110Q30KQ9 67 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 HEPHL1Q6MZM0 1159 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM135Q86UB9 458 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 APCDD1Q8J025 514 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PCYT2Q99447 389 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TUBB1Q9H4B7 451 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 GAPDHSO14556 408 aaPredicted RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PHYHO14832 338 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 ACSM4P0C7M7 580 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 DRD2P14416 443 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 THBS2P35442 1172 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PRAMEF8Q5VWM4 474 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PRAMEF7Q5VXH5 474 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF385DQ9H6B1 395 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SLCO3A1Q9UIG8 710 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 H3BML4 177 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 YKT6O15498 198 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 VEGFDO43915 354 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SPINT3P49223 89 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 USP53Q70EK8 1073 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF440Q8IYI8 595 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TEPSINQ96N21 525 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SLC6A16Q9GZN6 736 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 MAST2Q6P0Q8 1798 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 CD70P32970 193 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 ASAH1Q13510 395 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 NAGSQ8N159 534 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 GAR1Q9NY12 217 aaKnown RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 DOCK3Q8IZD9 2030 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 OR2A25A4D2G3 310 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 ZFP92A6NM28 416 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 FTCDNL1E5RQL4 147 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 LIPAP38571 399 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 RAD52P43351 418 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 FOXA1P55317 472 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 GPR50Q13585 617 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 MFSD6LQ8IWD5 586 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 BPIFCQ8NFQ6 507 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TRAF4Q9BUZ4 470 aaPredicted RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 ZFP57Q9NU63 452 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SCGB2A1O75556 95 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 TRAPPC2P0DI81 140 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms