RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	EFCAB9	A8MZ26	197 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	LRRN3	E7EW58	273 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545		H3BNX3	289 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR7A10	O76100	309 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	AKR7A3	O95154	331 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR6A2	O95222	327 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	PLG	P00747	810 aa	Predicted RBP	9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	MT-ATP6	P00846	226 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	BGLAP	P02818	100 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	SAG	P10523	405 aa	Predicted RBP	9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	HMGA2	P52926	109 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	PER3	P56645	1201 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	PRKCD	Q05655	676 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF74	Q16587	644 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	ACSF3	Q4G176	576 aa	Predicted RBP	9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	OTUD3	Q5T2D3	398 aa	Predicted RBP	9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	GTF2IRD2B	Q6EKJ0	949 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	TMEM225	Q6GV28	225 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	B3GNT6	Q6ZMB0	384 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545		Q6ZPB1	254 aa	Predicted RBP	9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	FCRLA	Q7L513	359 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	GTF2IRD2	Q86UP8	949 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	LINC00471	Q8N535	108 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	ICA1L	Q8NDH6	482 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR10G2	Q8NGC3	310 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR4C15	Q8NGM1	316 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR6S1	Q8NH40	331 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	FNDC9	Q8TBE3	224 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	GIPC3	Q8TF64	312 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	BPIFA2	Q96DR5	249 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	CENPN	Q96H22	339 aa	Predicted RBP	9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	PKP2	Q99959	881 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF426	Q9BUY5	554 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	PTDSS2	Q9BVG9	487 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	CALHM2	Q9HA72	323 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	MEPE	Q9NQ76	525 aa	Predicted RBP	9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	C20orf141	Q9NUB4	165 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	VNN3	Q9NY84	501 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	PDP1	Q9P0J1	537 aa	Predicted RBP	9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	TMEM5	Q9Y2B1	443 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF175	Q9Y473	711 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	EXPH5	Q8NEV8	1989 aa		9.1	□□□□□ -0.95
CPSF7-221	ENST00000543545	HTR3E	A5X5Y0	456 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	BLOC1S5-TXNDC5	H3BN57	136 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545		M0R082	166 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	CCL21	O00585	134 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	DNPH1	O43598	174 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	TGM6	O95932	706 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	FCGR2A	P12318	317 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	POU2F1	P14859	743 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF23	P17027	643 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	MAK	P20794	623 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	AHCY	P23526	432 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	CA7	P43166	264 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	GPR4	P46093	362 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	UQCRFS1	P47985	274 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	AGFG1	P52594	562 aa	Known RBP	9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	CTBP2	P56545	445 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	LTB	Q06643	244 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	PMPCA	Q10713	525 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	C1D	Q13901	141 aa	Known RBP	9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	GK3P	Q14409	553 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	RCN1	Q15293	331 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF239	Q16600	458 aa	Known RBP	9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	MICA	Q29983	383 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	NSUN5P2	Q63ZY6	315 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	TMEM211	Q6ICI0	200 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	H1FNT	Q75WM6	255 aa	Predicted RBP	9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	NANOGNB	Q7Z5D8	188 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	CCDC103	Q8IW40	242 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	LRRC17	Q8N6Y2	441 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	TMEM99	Q8N816	258 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	AQP11	Q8NBQ7	271 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR9Q2	Q8NGE9	314 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR5K1	Q8NHB7	308 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF417	Q8TAU3	575 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	GNPDA2	Q8TDQ7	276 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	WNT2B	Q93097	391 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	SDCCAG3	Q96C92	435 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	FAM46A	Q96IP4	442 aa	Known RBP	9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	MOGAT1	Q96PD6	335 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	UCN2	Q96RP3	112 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	FKRP	Q9H9S5	495 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	CHST11	Q9NPF2	352 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	KLHL13	Q9P2N7	655 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF229	Q9UJW7	825 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	CORIN	Q9Y5Q5	1042 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	EML6	Q6ZMW3	1958 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	SVIL	O95425	2214 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	BSN	Q9UPA5	3926 aa		9.09	□□□□□ -0.95
CPSF7-221	ENST00000543545	NBEA	Q8NFP9	2946 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	MED12	Q93074	2177 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545		A0A1B0GUH1	482 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	UNC119B	A6NIH7	251 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	CD8B2	A6NJW9	211 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	SAC3D1	A6NKF1	404 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	AQP7P3	A6NL99	342 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	FTCDNL1	E5RQL4	147 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545		E9PLN8	166 aa		9.08	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms