RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 HOXD4P09016 255 aaPredicted RBP9.59□□□□□ -0.87
CHFR-219ENST00000541341 PPP3CBP16298 524 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 TSPAN5P62079 268 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 ZNF155Q12901 538 aaPredicted RBP9.59□□□□□ -0.87
CHFR-219ENST00000541341 SRSF6Q13247 344 aaKnown RBP9.59□□□□□ -0.87
CHFR-219ENST00000541341 SLC9A5Q14940 896 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 ISXQ2M1V0 245 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 MPEG1Q2M385 716 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 LGALSLQ3ZCW2 172 aaPredicted RBP9.59□□□□□ -0.87
CHFR-219ENST00000541341 NHLRC3Q5JS37 347 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 LIN54Q6MZP7 749 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 PAQR6Q6TCH4 344 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 LRRN1Q6UXK5 716 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 ZNF620Q6ZNG0 422 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 ASB18Q6ZVZ8 466 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 KLBQ86Z14 1044 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 PDZD9Q8IXQ8 264 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 FTMTQ8N4E7 242 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 OR11H7Q8NGC8 314 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 WDR48Q8TAF3 677 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 S100A16Q96FQ6 103 aaKnown RBP9.59□□□□□ -0.87
CHFR-219ENST00000541341 CD180Q99467 661 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 RERGLQ9H628 205 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 SLC35C2Q9NQQ7 365 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 PCDHB16Q9NRJ7 776 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 TAS2R5Q9NYW4 299 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 MBD2Q9UBB5 411 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 UPB1Q9UBR1 384 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 RPS6KB2Q9UBS0 482 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 ENTPD2Q9Y5L3 495 aa9.59□□□□□ -0.87
CHFR-219ENST00000541341 ASH1LQ9NR48 2969 aaKnown RBP9.59□□□□□ -0.87
CHFR-219ENST00000541341 BOD1L1Q8NFC6 3051 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 UNC119BA6NIH7 251 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 J3QKU1 62 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 NDUFS4O43181 175 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 KHDRBS3O75525 346 aaKnown RBP9.58□□□□□ -0.88
CHFR-219ENST00000541341 OR12D1P0DN82 309 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 CALCBP10092 127 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 ZNF3P17036 446 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 CSNK2A2P19784 350 aaPredicted RBP9.58□□□□□ -0.88
CHFR-219ENST00000541341 GIFP27352 417 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 S100A11P31949 105 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 BSGP35613 385 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 GPR1P46091 355 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 OMPP47874 163 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 LSSP48449 732 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 DUSP3P51452 185 aaPredicted RBP9.58□□□□□ -0.88
CHFR-219ENST00000541341 BLVRAP53004 296 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 RGS8P57771 180 aaPredicted RBP9.58□□□□□ -0.88
CHFR-219ENST00000541341 KIAA1024LP59773 190 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 HNRNPKP61978 463 aaKnown RBP eCLIP9.58□□□□□ -0.88
CHFR-219ENST00000541341 REEP5Q00765 189 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 MC1RQ01726 317 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 HSPB3Q12988 150 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 SLC36A2Q495M3 483 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 PRRT3Q5FWE3 981 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 OLFML2AQ68BL7 652 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 OR4C11Q6IEV9 310 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 RPL22L1Q6P5R6 122 aaKnown RBP9.58□□□□□ -0.88
CHFR-219ENST00000541341 TMEM65Q6PI78 240 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 UQCC3Q6UW78 93 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 LYPD4Q6UWN0 246 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 TMEM91Q6ZNR0 172 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 RD3Q7Z3Z2 195 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 CEACAM19Q7Z692 300 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 PARGQ86W56 976 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 RASGEF1AQ8N9B8 481 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 OR2L2Q8NH16 312 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 ABHD4Q8TB40 342 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 SMAP2Q8WU79 429 aaPredicted RBP9.58□□□□□ -0.88
CHFR-219ENST00000541341 CCDC107Q8WV48 283 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 GIMAP1Q8WWP7 306 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 DIO2Q92813 273 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 PTP4A1Q93096 173 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 YIPF5Q969M3 257 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 RBM18Q96H35 190 aaKnown RBP9.58□□□□□ -0.88
CHFR-219ENST00000541341 CCDC120Q96HB5 630 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 FCRL4Q96PJ5 515 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 APOOQ9BUR5 198 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 SHARPINQ9H0F6 387 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 CTPS2Q9NRF8 586 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 SDHAF2Q9NX18 166 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 MALT1Q9UDY8 824 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 RASD1Q9Y272 281 aa9.58□□□□□ -0.88
CHFR-219ENST00000541341 ARHGEF17Q96PE2 2063 aaPredicted RBP9.58□□□□□ -0.88
CHFR-219ENST00000541341 TRAV6A0A075B6T7 132 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 A0A0D9SG52 128 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 SPTY2D1-AS1A0A0U1RR47 76 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 MFSD2BA6NFX1 497 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 CD8B2A6NJW9 211 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 HSPB2A8KAH6 182 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 A8MXK9 166 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 ACOT7O00154 380 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 AIPO00170 330 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 PLPP1O14494 284 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 ABCD4O14678 606 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 TSPAN4O14817 238 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 KRT33AO76009 404 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 OR2A4O95047 310 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 TNFSF15O95150 251 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms