RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SIGLEC6O43699 453 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 TPPPO94811 219 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 UQCRC1P31930 480 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 THBS2P35442 1172 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 PPM1FP49593 454 aaPredicted RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 AGFG1P52594 562 aaKnown RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 RGS8P57771 180 aaPredicted RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 RAB14P61106 215 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 HSD11B2P80365 405 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 FOXD4Q12950 439 aaPredicted RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 NR0B2Q15466 257 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 ZNHIT3Q15649 155 aaPredicted RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 GRK1Q15835 563 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 SMUG1Q53HV7 270 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 TOR2AQ5JU69 321 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 NKAIN2Q5VXU1 208 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 GPR139Q6DWJ6 353 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 SFXN4Q6P4A7 337 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 KLBQ86Z14 1044 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 OR4F15Q8NGB8 312 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 OR2I1PQ8NGU4 316 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 OR56B4Q8NH76 319 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 NDC1Q9BTX1 674 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 MRI1Q9BV20 369 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 ZCCHC4Q9H5U6 513 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 ZFP64Q9NPA5 681 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 UBQLN2Q9UHD9 624 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 GMEB2Q9UKD1 530 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 GPR52Q9Y2T5 361 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 NINQ8N4C6 2090 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 LY6G6EA0A0G2JKS1 128 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 CD8B2A6NJW9 211 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 KHNYNO15037 678 aaKnown RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 FMO6PO60774 539 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 RCBTB2O95199 551 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 ZIC2O95409 532 aaPredicted RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 CBX7O95931 251 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 TCRBP04435 133 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 SULT1A3P0DMM9 295 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 SULT1A4P0DMN0 295 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 CD8BP10966 210 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 GFERP55789 205 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 EEF1A1P68104 462 aaKnown RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 YOD1Q5VVQ6 348 aaPredicted RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 NIPAL3Q6P499 406 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 ZC3H14Q6PJT7 736 aaKnown RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 OLIG3Q7RTU3 272 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 PXKQ7Z7A4 578 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 SLITRK4Q8IW52 837 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 TOMM5Q8N4H5 51 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 RIT1Q92963 219 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 ZG16BQ96DA0 208 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 FAM46AQ96IP4 442 aaKnown RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 ALG8Q9BVK2 526 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 QRSL1Q9H0R6 528 aaKnown RBP16.81■□□□□ 0.28
SDC2-202ENST00000518385 SEMA4GQ9NTN9 838 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 HAO2Q9NYQ3 351 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 CAMK2AQ9UQM7 478 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 U3KQA8 63 aa16.81■□□□□ 0.28
SDC2-202ENST00000518385 TEX13CA0A0J9YWL9 993 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 SHISA3A0PJX4 238 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 LRRN3E7EW58 273 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 HYAL3O43820 417 aaPredicted RBP16.8■□□□□ 0.28
SDC2-202ENST00000518385 CTSBP07858 339 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 NID1P14543 1247 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 S1PR1P21453 382 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 CD1CP29017 333 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 BTCP35070 178 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 ARL4DP49703 201 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 SNRPD2P62316 118 aaKnown RBP16.8■□□□□ 0.28
SDC2-202ENST00000518385 MAPK14Q16539 360 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 ZNF791Q3KP31 576 aaPredicted RBP16.8■□□□□ 0.28
SDC2-202ENST00000518385 PLA2G2CQ5R387 149 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 WDR74Q6RFH5 385 aaPredicted RBP16.8■□□□□ 0.28
SDC2-202ENST00000518385 RANBP3LQ86VV4 465 aaPredicted RBP16.8■□□□□ 0.28
SDC2-202ENST00000518385 ZFP41Q8N8Y5 198 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 OR5W2Q8NH69 310 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 CCDC74AQ96AQ1 378 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 NXPE2Q96DL1 559 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 MRPL48Q96GC5 212 aaKnown RBP16.8■□□□□ 0.28
SDC2-202ENST00000518385 SLC41A3Q96GZ6 507 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 DGAT2Q96PD7 388 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 LRRN3Q9H3W5 708 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 SMOC1Q9H4F8 434 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 WDR70Q9NW82 654 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 MED9Q9NWA0 146 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 HCN3Q9P1Z3 774 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 CHST2Q9Y4C5 530 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 MMACHCQ9Y4U1 282 aa16.8■□□□□ 0.28
SDC2-202ENST00000518385 BRINP1O60477 761 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 SC5DO75845 299 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 ECDO95905 644 aaPredicted RBP16.79■□□□□ 0.28
SDC2-202ENST00000518385 CT62P0C5K7 136 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 NRG3P56975 720 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 AP3S2P59780 193 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 CFHR1Q03591 330 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 SNTA1Q13424 505 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 BCL2L15Q5TBC7 163 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 ZNF836Q6ZNA1 936 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 PRSS42Q7Z5A4 293 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms