RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MED20Q9H944 212 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 MTFP1Q9UDX5 166 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 TRBV2A0A0J9YWF9 115 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 BNIP3LO60238 219 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 THY1P04216 161 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 RPN2P04844 631 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 S100A9P06702 114 aaKnown RBP14.64□□□□□ -0.07
SCLT1-208ENST00000506368 THBS1P07996 1170 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 ACADLP28330 430 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 PBLDP30039 288 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-208ENST00000506368 DCTDP32321 178 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 PRKAG1P54619 331 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 TAS2R20P59543 309 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 AVPI1Q5T686 147 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 ARHGAP11AQ6P4F7 1023 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF613Q6PF04 617 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 RPTNQ6XPR3 784 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 GAREM2Q75VX8 874 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 TMEM173Q86WV6 379 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-208ENST00000506368 DCUN1D3Q8IWE4 304 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 TMEM185AQ8NFB2 350 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 OR13C5Q8NGS8 318 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 ELP5Q8TE02 316 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 PELI1Q96FA3 418 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 DERL3Q96Q80 235 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF251Q9BRH9 671 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 OR51V1Q9H2C8 321 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 CERS4Q9HA82 394 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 ZFP57Q9NU63 452 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 SLC7A7Q9UM01 511 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF443Q9Y2A4 671 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-208ENST00000506368 INSL6Q9Y581 213 aa14.64□□□□□ -0.07
SCLT1-208ENST00000506368 PLXND1Q9Y4D7 1925 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 DENND4AQ7Z401 1863 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 FMO6PO60774 539 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 IGF2P01344 180 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 S100A6P06703 90 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 LINC00271P0C7V0 271 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 OR1D2P34982 312 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 SORDQ00796 357 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 GUCA2BQ16661 112 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 FAM122BQ7Z309 247 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 PUSL1Q8N0Z8 303 aaKnown RBP14.63□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF461Q8TAF7 563 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 BCL7CQ8WUZ0 217 aaPredicted RBP14.63□□□□□ -0.07
SCLT1-208ENST00000506368 OR14A2Q96R54 314 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 HCAR1Q9BXC0 346 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 ACTRT3Q9BYD9 372 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 QRSL1Q9H0R6 528 aaKnown RBP14.63□□□□□ -0.07
SCLT1-208ENST00000506368 YIPF1Q9Y548 306 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 XIRP2A4UGR9 3374 aa14.63□□□□□ -0.07
SCLT1-208ENST00000506368 ZC3H12DA2A288 527 aaKnown RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 HOXA2O43364 376 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 FRS3O43559 492 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 LCMT2O60294 686 aaKnown RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 LILRB5O75023 590 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 GLSO94925 669 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 PAX6P26367 422 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 FXYD6P3P58550 94 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 STXBP1P61764 594 aaKnown RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 SNTB1Q13884 538 aaKnown RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 SLC9A5Q14940 896 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 ELP2Q6IA86 826 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 LDLRAD3Q86YD5 345 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 MUC20Q8N307 709 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 RELL2Q8NC24 303 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 TMEM239Q8WW34 195 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 KLK6Q92876 244 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 TCEAL3Q969E4 200 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 LRIG1Q96JA1 1093 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 PRSS27Q9BQR3 290 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 NKX2-4Q9H2Z4 354 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF334Q9HCZ1 680 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 APMAPQ9HDC9 416 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 POLMQ9NP87 494 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 MYEF2Q9P2K5 600 aaKnown RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 GPR34Q9UPC5 381 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 PLEKHM1Q9Y4G2 1056 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 PRUNE2Q8WUY3 3088 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 ABLIM3O94929 683 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 GALTP07902 379 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 MRPL3P09001 348 aaKnown RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 AKAIN1P0CW23 69 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 FOLR2P14207 255 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 CSNK2A2P19784 350 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 NOS3P29474 1203 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 MPIP34949 423 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 CTSOP43234 321 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 SSR2P43308 183 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 PPIAP62937 165 aaKnown RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 COL19A1Q14993 1142 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 CEBPEQ15744 281 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 CSRP2Q16527 193 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 IGSF11Q5DX21 431 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 SPOUT1Q5T280 376 aaKnown RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 OLIG3Q7RTU3 272 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 OR52B4Q8NGK2 314 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 CNN2Q99439 309 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms