RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ZNF207O43670 478 aaKnown RBP0.74□□□□□ -2.29
HPS3-205ENST00000478525 DUX1O43812 170 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 RBMY1DP0C7P1 496 aaKnown RBP0.74□□□□□ -2.29
HPS3-205ENST00000478525 STARD6P59095 220 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 RAP1AP62834 184 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 SGCAQ16586 387 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 SLC5A12Q1EHB4 618 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 NTM-AS1Q6ZSK4 140 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 C16orf62Q7Z3J2 963 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 MIER3Q7Z3K6 550 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 ZNF664Q8N3J9 261 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 GDAP1Q8TB36 358 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 TCTEX1D2Q8WW35 142 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 LRRC58Q96CX6 371 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 MMADHCQ9H3L0 296 aaPredicted RBP0.74□□□□□ -2.29
HPS3-205ENST00000478525 POLD4Q9HCU8 107 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 COL5A3P25940 1745 aaPredicted RBP0.74□□□□□ -2.29
HPS3-205ENST00000478525 TMEM223A0PJW6 202 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 OLFM2O95897 454 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 PRB1P04280 392 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 POU2F1P14859 743 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 PAICSP22234 425 aaKnown RBP0.73□□□□□ -2.29
HPS3-205ENST00000478525 ATL3Q6DD88 541 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 C11orf88Q6PI97 169 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 TRIM69Q86WT6 500 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 TMEM246Q9BRR3 403 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 CHAC1Q9BUX1 264 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 SUDS3Q9H7L9 328 aaPredicted RBP0.73□□□□□ -2.29
HPS3-205ENST00000478525 GRPEL1Q9HAV7 217 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 AP4B1Q9Y6B7 739 aa0.73□□□□□ -2.29
HPS3-205ENST00000478525 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 NFASCO94856 1347 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 IGHV2-70DA0A0C4DH43 119 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 WASH3PC4AMC7 463 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 STX7O15400 261 aaKnown RBP0.72□□□□□ -2.29
HPS3-205ENST00000478525 SLC31A2O15432 143 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 ZDHHC11BP0C7U3 371 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 RBMY1A1P0DJD3 496 aaKnown RBP0.72□□□□□ -2.29
HPS3-205ENST00000478525 PRDX6P30041 224 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 MAGEA5P43359 124 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 ZNF616Q08AN1 781 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 RIPK1Q13546 671 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 SNX1Q13596 522 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 RBMY1FQ15415 496 aaKnown RBP0.72□□□□□ -2.29
HPS3-205ENST00000478525 CYTH1Q15438 398 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 WASH2PQ6VEQ5 465 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 BIVMQ86UB2 503 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 NAP1L3Q99457 506 aaPredicted RBP0.72□□□□□ -2.29
HPS3-205ENST00000478525 STACQ99469 402 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 C12orf10Q9HB07 376 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 FOLH1BQ9HBA9 442 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 PRMT8Q9NR22 394 aaPredicted RBP0.72□□□□□ -2.29
HPS3-205ENST00000478525 IL20RAQ9UHF4 553 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 CDH9Q9ULB4 789 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 RNF6Q9Y252 685 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 SCN1AP35498 2009 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 PTPRTO14522 1441 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 TNS2Q63HR2 1409 aa0.72□□□□□ -2.29
HPS3-205ENST00000478525 CLSPNQ9HAW4 1339 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 A0A1W2PRV1 198 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 DCTN6O00399 190 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 RAD51BO15315 384 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 CXCL10P02778 98 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 BGLAPP02818 100 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 ABHD2P08910 425 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 IGHV1-8P0DP01 117 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 HPGDP15428 266 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 CYLC1P35663 651 aaPredicted RBP0.71□□□□□ -2.3
HPS3-205ENST00000478525 BCL7AQ4VC05 210 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 SMARCD3Q6STE5 483 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 GRAMD2AQ8IUY3 354 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 LRRC52Q8N7C0 313 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 RTN4IP1Q8WWV3 396 aaPredicted RBP0.71□□□□□ -2.3
HPS3-205ENST00000478525 ADPGKQ9BRR6 497 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 CTPS2Q9NRF8 586 aa0.71□□□□□ -2.3
HPS3-205ENST00000478525 F11RQ9Y624 299 aaKnown RBP0.71□□□□□ -2.3
HPS3-205ENST00000478525 IGHV5-10-1A0A0J9YXX1 117 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 STAMBPO95630 424 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 GYG1P46976 350 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 FGF8P55075 233 aaPredicted RBP0.7□□□□□ -2.3
HPS3-205ENST00000478525 LOXL1Q08397 574 aaPredicted RBP0.7□□□□□ -2.3
HPS3-205ENST00000478525 KRTAP21-3Q3LHN1 58 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 C12orf60Q5U649 245 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 CBLN3Q6UW01 205 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 OR2G3Q8NGZ4 309 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 FGF11Q92914 225 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 DNAJC1Q96KC8 554 aaKnown RBP0.7□□□□□ -2.3
HPS3-205ENST00000478525 SPATA13Q96N96 652 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 TIMM29Q9BSF4 260 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 DHCR7Q9UBM7 475 aaKnown RBP0.7□□□□□ -2.3
HPS3-205ENST00000478525 SPACA6W5XKT8 324 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 ZSWIM8A7E2V4 1837 aa0.7□□□□□ -2.3
HPS3-205ENST00000478525 GPATCH8Q9UKJ3 1502 aaKnown RBP0.69□□□□□ -2.3
HPS3-205ENST00000478525 LGALS8O00214 317 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 HSP90AB1P08238 724 aaKnown RBP0.69□□□□□ -2.3
HPS3-205ENST00000478525 UBTFL1P0CB47 393 aaPredicted RBP0.69□□□□□ -2.3
HPS3-205ENST00000478525 PRPS2P11908 318 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 ANXA13P27216 316 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 CASP3P42574 277 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 EWSR1Q01844 656 aaKnown RBP eCLIP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms