RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ELF5Q9UKW6 265 aaPredicted RBP3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 A4GNTQ9UNA3 340 aa3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 COPS3Q9UNS2 423 aa3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 YIPF1Q9Y548 306 aa3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 KPTNQ9Y664 436 aa3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 COL5A2P05997 1499 aaPredicted RBP3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 CAMTA1Q9Y6Y1 1673 aa3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 AKAP12Q02952 1782 aa3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 MON2Q7Z3U7 1717 aa3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 PEAK1Q9H792 1746 aa3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 EMSYQ7Z589 1322 aa3.19□□□□□ -1.9
FNDC3B-209ENST00000478016 RGPD3A6NKT7 1758 aaPredicted RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 RGPD4Q7Z3J3 1758 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 MYOM1P52179 1685 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CCDC7Q96M83 1385 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 LOC105371242A0A075B767 164 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 A0A087X0K7 114 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 A0A1W2PRG6 482 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 TMEM129A0AVI4 362 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SMCO3A2RU48 225 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 RNF222A6NCQ9 220 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 METTL21EPA6NDL7 271 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ZNF840PA6NDX5 716 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 FAM90A10PA6NDY2 464 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CGB1A6NKQ9 187 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 OR11H12B2RN74 326 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 KLRF2D3W0D1 207 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 H0YGN5 161 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 H3BNX3 289 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 TEX46H3BTG2 121 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 M0QXV9 152 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 EEF2KO00418 725 aaKnown RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SDHDO14521 159 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 PHYHO14832 338 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 DSCR3O14972 297 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 INPP4BO15327 924 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ZNF749O43361 778 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 XRCC2O43543 280 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 TMPRSS11DO60235 418 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ENTPD5O75356 428 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SRP72O76094 671 aaKnown RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ETHE1O95571 254 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ATP6V1G2O95670 118 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CCNE2O96020 404 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 GSRP00390 522 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SERPINA1P01009 418 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 IFNA21P01568 189 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 IGHG3P01860 377 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CHRM4P08173 479 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 DANCRP0C864 163 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SPP1P10451 314 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 FOLR1P15328 257 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 NCK1P16333 377 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 UQCRC2P22695 453 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CD38P28907 300 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 RBMS1P29558 406 aaKnown RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CALCRP30988 508 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 PRDX2P32119 198 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SSTR5P35346 364 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 AVPR1AP37288 418 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 RGRP47804 291 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SOX2P48431 317 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 GALCP54803 685 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 FAM3BP58499 235 aaPredicted RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 VLDLRP98155 873 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 HOXA4Q00056 320 aaPredicted RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 FOLH1Q04609 750 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 MBTD1Q05BQ5 628 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SRSF1Q07955 248 aaKnown RBP eCLIP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 AESQ08117 197 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ZP4Q12836 540 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CNTN1Q12860 1018 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SRSF6Q13247 344 aaKnown RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ACOX1Q15067 660 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 OR4D1Q15615 310 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 GRK1Q15835 563 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 TNXAQ16473 311 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 POU2AF1Q16633 256 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ST3GAL2Q16842 350 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 LRIF1Q5T3J3 769 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CYB5R2Q6BCY4 276 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 OR4F3Q6IEY1 312 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ZNF770Q6IQ21 691 aaPredicted RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 ZNF774Q6NX45 483 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 GJB7Q6PEY0 223 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SYCE2Q6PIF2 218 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 KIRREL2Q6UWL6 708 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 DHRS13Q6UX07 377 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 NAPRTQ6XQN6 538 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 SH2D5Q6ZV89 423 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 TMPRSS11FQ6ZWK6 438 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CYB5R4Q7L1T6 521 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 DET1Q7L5Y6 550 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 APTXQ7Z2E3 356 aaKnown RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 DPY19L4Q7Z388 723 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CTU1Q7Z7A3 348 aaKnown RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 MRPL52Q86TS9 123 aaKnown RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 RANBP3LQ86VV4 465 aaPredicted RBP3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 TGIF2LXQ8IUE1 241 aa3.18□□□□□ -1.9
FNDC3B-209ENST00000478016 CBWD2Q8IUF1 395 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms